DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRAALQALK
Uniprot ID:
Q96CF2
Source protein:
Charged multivesicular body protein 4c
Source gene:
CHMP4C
Class:
DEG_APCC_DBOX_1
Location:
62:70
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5731
ASA_SCORE:
96.9222
COIL:
0.0898
CONS_SCORE:
0.694
DSS_SCORE:
0.4923
HELIX:
0.9121
FCONS_SCORE:
1.1523
RIG_SCORE:
0.7932
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R63Q
TCGA-06-5416
GBM
TCGA
KRAALQALK
DEG_APCC_DBOX_1
0.7329
p.R63Q
DO10880
GBM
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.7329
p.R63Q
DO222423
MELA
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.7329
p.R63Q
DO37425
SKCM
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.7329
p.Q78H
TCGA-DX-A6YS
SARC
TCGA
KRAALQALK
DEG_APCC_DBOX_1
0.1111
p.Q78H
DO220005
SARC
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.1111
p.R71I
DO222884
COCA
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.3056
p.A68S
DO229036
LICA
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.6477
p.E76G
DO229268
THCA
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.1667
p.E76K
SIDM00348
Esophageal Squamous Cell Carcinoma
GDSC
KRAALQALK
DEG_APCC_DBOX_1
0.1667
p.E76K
ACH-000488
Esophageal Cancer
CCLE
KRAALQALK
DEG_APCC_DBOX_1
0.1667
p.E76K
TE-11
oesophagus
COSMIC
KRAALQALK
DEG_APCC_DBOX_1
0.1667
p.H57Q
ACH-001802
Liposarcoma
CCLE
KRAALQALK
DEG_APCC_DBOX_1
0.1944
Drug responses associated with CHMP4C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRAALQALK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96CF2
Charged multivesicular body protein 4c
DEG_APCC_DBOX_1
62:70
KRAALQALK
APC,CDC20,FZR1
0.5731
More...
Q9H444
Charged multivesicular body protein 4b
DEG_APCC_DBOX_1
62:70
KRAALQALK
APC,CDC20,FZR1
0.8257
More...