DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRAALQALK
Uniprot ID:
Q9H444
Source protein:
Charged multivesicular body protein 4b
Source gene:
CHMP4B
Class:
DEG_APCC_DBOX_1
Location:
62:70
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8257
ASA_SCORE:
89.4889
COIL:
0.0302
CONS_SCORE:
0.709
DSS_SCORE:
0.512
HELIX:
0.9702
FCONS_SCORE:
1.1822
RIG_SCORE:
0.7918
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R71S
TCGA-24-0980
OV
TCGA
KRAALQALK
DEG_APCC_DBOX_1
0.3056
p.R71S
DO32487
OV
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.3056
p.A68T
TCGA-2W-A8YY
CESC
TCGA
KRAALQALK
DEG_APCC_DBOX_1
0.6028
p.A68T
DO223732
CESC
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.6028
p.Y75H
TCGA-67-3771
LUAD
TCGA
KRAALQALK
DEG_APCC_DBOX_1
0.1944
p.Y75H
DO25797
LUAD
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.1944
p.R71C
TCGA-EC-A24G
UCEC
TCGA
KRAALQALK
DEG_APCC_DBOX_1
0.3056
p.R71C
DO40996
UCEC
ICGC
KRAALQALK
DEG_APCC_DBOX_1
0.3056
p.T59I
SIDM00070
B-Cell Non-Hodgkin's Lymphoma
GDSC
KRAALQALK
DEG_APCC_DBOX_1
0.25
p.T59I
ACH-002393
Lymphoma
CCLE
KRAALQALK
DEG_APCC_DBOX_1
0.25
p.T59I
CRO-AP3
NS
COSMIC
KRAALQALK
DEG_APCC_DBOX_1
0.25
Drug responses associated with CHMP4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRAALQALK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96CF2
Charged multivesicular body protein 4c
DEG_APCC_DBOX_1
62:70
KRAALQALK
APC,CDC20,FZR1
0.5731
More...
Q9H444
Charged multivesicular body protein 4b
DEG_APCC_DBOX_1
62:70
KRAALQALK
APC,CDC20,FZR1
0.8257
More...