DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KRPPLRRVR
Uniprot ID:
P48788
Source protein:
Troponin I, fast skeletal muscle
Source gene:
TNNI2
Class:
DEG_APCC_DBOX_1
Location:
108:116
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8642
ASA_SCORE:
104.4222
COIL:
0.6333
CONS_SCORE:
0.9125
DSS_SCORE:
0.3819
HELIX:
0.2842
FCONS_SCORE:
1.018
RIG_SCORE:
0.7799
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D102Y
TCGA-18-3411
LUSC
TCGA
KRPPLRRVR
DEG_APCC_DBOX_1
0.1667
p.D102Y
DO26758
LUSC
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.1667
p.R104W
TCGA-AJ-A3BH
UCEC
TCGA
KRPPLRRVR
DEG_APCC_DBOX_1
0.2222
p.R104W
DO41638
UCEC
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.2222
p.D102N
TCGA-AJ-A3EL
UCEC
TCGA
KRPPLRRVR
DEG_APCC_DBOX_1
0.1667
p.D102N
DO41542
UCEC
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.1667
p.R113W
TCGA-CG-4306
STAD
TCGA
KRPPLRRVR
DEG_APCC_DBOX_1
0.7523
p.R113W
TCGA-ZS-A9CF
LIHC
TCGA
KRPPLRRVR
DEG_APCC_DBOX_1
0.7523
p.R113W
DO49722
LIHC
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.7523
p.R113W
DO38567
STAD
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.7523
p.K108E
TCGA-DI-A1BU
UCEC
TCGA
KRPPLRRVR
DEG_APCC_DBOX_1
0.591
p.K108E
DO42023
UCEC
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.591
p.G105A
TCGA-F7-A624
HNSC
TCGA
KRPPLRRVR
DEG_APCC_DBOX_1
0.25
p.G105A
DO44440
HNSC
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.25
p.R113Q
DO222765
COCA
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.6218
p.V115L
DO229034
LICA
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.5654
p.A119S
DO229041
LICA
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.25
p.R104L
DO229008
LICA
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.2222
p.V115M
DO229256
LMS
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.6097
p.D120V
DO25189
LUAD
ICGC
KRPPLRRVR
DEG_APCC_DBOX_1
0.2222
p.R116C
SIDM01314
Colorectal Carcinoma
GDSC
KRPPLRRVR
DEG_APCC_DBOX_1
0.719
Drug responses associated with TNNI2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRPPLRRVR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P19237
Troponin I, slow skeletal muscle
DEG_APCC_DBOX_1
109:117
KRPPLRRVR
APC,CDC20,FZR1
0.9447
More...
P48788
Troponin I, fast skeletal muscle
DEG_APCC_DBOX_1
108:116
KRPPLRRVR
APC,CDC20,FZR1
0.8642
More...