DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KSPVFSD
Uniprot ID:
O00566
Source protein:
U3 small nucleolar ribonucleoprotein protein MPP10
Source gene:
MPHOSPH10
Class:
LIG_APCC_ABBAyCdc20_2
Location:
162:168
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7582
ASA_SCORE:
95.9857
COIL:
0.8943
CONS_SCORE:
0.3508
DSS_SCORE:
0.5985
HELIX:
0.0803
FCONS_SCORE:
0.9174
RIG_SCORE:
0.6574
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D174N
TCGA-50-5066
LUAD
TCGA
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.1667
p.D174N
DO25040
LUAD
ICGC
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.1667
p.S156N
TCGA-BT-A3PH
BLCA
TCGA
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.1667
p.S156N
DO856
BLCA
ICGC
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.1667
p.D168N
TCGA-CR-5248
HNSC
TCGA
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.6932
p.D168N
DO14694
HNSC
ICGC
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.6932
p.E169K
TCGA-NC-A5HD
LUSC
TCGA
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.3056
p.E169K
DO219184
LUSC
ICGC
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D174H
TCGA-VS-AA62
CESC
TCGA
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.1667
p.D174H
DO219745
CESC
ICGC
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.1667
p.L160M
DO222602
COCA
ICGC
KSPVFSD
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with MPHOSPH10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KSPVFSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00566
U3 small nucleolar ribonucleoprotein protein MPP10
LIG_APCC_ABBAyCdc20_2
162:168
KSPVFSD
APC,CDC20,FZR1
0.7582
More...
Q6ZQQ2
Spermatogenesis-associated protein 31D1
LIG_APCC_ABBAyCdc20_2
1547:1553
KSPVFSD
APC,CDC20,FZR1
0.9842
More...