DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEVHVD
Uniprot ID:
Q9UK28
Source protein:
Transmembrane protein 59-like
Source gene:
TMEM59L
Class:
LIG_APCC_ABBA_1
Location:
217:222
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9757
ASA_SCORE:
76.8333
COIL:
0.764
CONS_SCORE:
0.3562
DSS_SCORE:
0.4575
HELIX:
0.1553
FCONS_SCORE:
1.0747
RIG_SCORE:
0.783
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V221L
TCGA-05-5425
LUAD
TCGA
LEVHVD
LIG_APCC_ABBA_1
0.5654
p.V221L
DO26270
LUAD
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.5654
p.T208I
TCGA-21-1079
LUSC
TCGA
LEVHVD
LIG_APCC_ABBA_1
0.0833
p.T208I
DO26846
LUSC
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.0833
p.R210Q
TCGA-85-A4QQ
LUSC
TCGA
LEVHVD
LIG_APCC_ABBA_1
0.1389
p.R210Q
DO223114
ESCA
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.1389
p.R210Q
DO45427
LUSC
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.1389
p.R210Q
SIDM00193
Colorectal Carcinoma
GDSC
LEVHVD
LIG_APCC_ABBA_1
0.1389
p.R210Q
ACH-000991
Colon/Colorectal Cancer
CCLE
LEVHVD
LIG_APCC_ABBA_1
0.1389
p.R210Q
SNU-81
large_intestine
COSMIC
LEVHVD
LIG_APCC_ABBA_1
0.1389
p.V230A
TCGA-AP-A054
UCEC
TCGA
LEVHVD
LIG_APCC_ABBA_1
0.1111
p.V230A
DO42256
UCEC
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.1111
p.V221M
TCGA-BG-A221
UCEC
TCGA
LEVHVD
LIG_APCC_ABBA_1
0.6097
p.V221M
DO42384
UCEC
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.6097
p.G225A
TCGA-BG-A222
UCEC
TCGA
LEVHVD
LIG_APCC_ABBA_1
0.25
p.G225A
DO42977
UCEC
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.25
p.V207M
TCGA-D3-A8GC
SKCM
TCGA
LEVHVD
LIG_APCC_ABBA_1
0.0556
p.V207M
DO50281
SKCM
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.0556
p.H213Y
TCGA-EO-A3AU
UCEC
TCGA
LEVHVD
LIG_APCC_ABBA_1
0.2222
p.H213Y
DO43827
UCEC
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.2222
p.S212P
DO233885
GACA
ICGC
LEVHVD
LIG_APCC_ABBA_1
0.1944
p.V224I
SIDM00282
Colorectal Carcinoma
GDSC
LEVHVD
LIG_APCC_ABBA_1
0.2778
p.V224I
ACH-000998
Colon/Colorectal Cancer
CCLE
LEVHVD
LIG_APCC_ABBA_1
0.2778
p.V224I
CW-2
large_intestine
COSMIC
LEVHVD
LIG_APCC_ABBA_1
0.2778
p.G225C
SIDM00537
Colorectal Carcinoma
GDSC
LEVHVD
LIG_APCC_ABBA_1
0.25
p.G225C
ACH-000982
Colon/Colorectal Cancer
CCLE
LEVHVD
LIG_APCC_ABBA_1
0.25
p.G225C
ACH-001345
Colon/Colorectal Cancer
CCLE
LEVHVD
LIG_APCC_ABBA_1
0.25
p.G225C
GP5d
large_intestine
COSMIC
LEVHVD
LIG_APCC_ABBA_1
0.25
p.P226L
SIDM01628
Non-Small Cell Lung Carcinoma
GDSC
LEVHVD
LIG_APCC_ABBA_1
0.2222
p.P226L
ACH-000851
Lung Cancer
CCLE
LEVHVD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with TMEM59L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEVHVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60884
DnaJ homolog subfamily A member 2
LIG_APCC_ABBA_1
217:222
LEVHVD
APC,CDC20,FZR1
0.9391
More...
Q9UK28
Transmembrane protein 59-like
LIG_APCC_ABBA_1
217:222
LEVHVD
APC,CDC20,FZR1
0.9757
More...