DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGPHQD
Uniprot ID:
Q86TB3
Source protein:
Alpha-protein kinase 2
Source gene:
ALPK2
Class:
LIG_APCC_ABBA_1
Location:
433:438
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6201
ASA_SCORE:
87.9667
COIL:
0.8978
CONS_SCORE:
0.414
DSS_SCORE:
0.703
HELIX:
0.0345
FCONS_SCORE:
1.237
RIG_SCORE:
0.6459
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L433F
TCGA-05-4396
LUAD
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.587
p.L433F
DO23838
LUAD
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.587
p.Q437K
TCGA-77-7463
LUSC
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.5833
p.Q437K
DO26716
LUSC
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.5833
p.H436Q
TCGA-77-7463
LUSC
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.7582
p.H436Q
DO26716
LUSC
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.7582
p.R448I
TCGA-A5-A0G1
UCEC
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.0556
p.R448I
DO42472
UCEC
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.0556
p.L431H
TCGA-AB-2806
LAML
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.2778
p.L431H
DO21283
LAML
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.2778
p.Q437P
TCGA-BS-A0UJ
UCEC
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.5924
p.Q437P
DO42745
UCEC
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.5924
p.G439R
TCGA-EE-A2A5
SKCM
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.3056
p.G439R
DO37941
SKCM
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.3056
p.P435H
TCGA-GN-A263
SKCM
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.7694
p.P435H
DO37766
SKCM
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.7694
p.E445K
TCGA-IA-A83W
KIRP
TCGA
LGPHQD
LIG_APCC_ABBA_1
0.1389
p.E445K
DO51566
KIRP
ICGC
LGPHQD
LIG_APCC_ABBA_1
0.1389
p.G434E
SIDM00217
Colorectal Carcinoma
GDSC
LGPHQD
LIG_APCC_ABBA_1
0.6087
p.G434E
ACH-000999
Colon/Colorectal Cancer
CCLE
LGPHQD
LIG_APCC_ABBA_1
0.6087
p.G434E
SNU-1040
large_intestine
COSMIC
LGPHQD
LIG_APCC_ABBA_1
0.6087
p.T427S
SIDM00017
Squamous Cell Lung Carcinoma
GDSC
LGPHQD
LIG_APCC_ABBA_1
0.1667
p.T427S
ACH-000912
Lung Cancer
CCLE
LGPHQD
LIG_APCC_ABBA_1
0.1667
Drug responses associated with ALPK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGPHQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86TB3
Alpha-protein kinase 2
LIG_APCC_ABBA_1
433:438
LGPHQD
APC,CDC20,FZR1
0.6201
More...
Q9H8Y5
Ankyrin repeat and zinc finger domain-containing protein 1
LIG_APCC_ABBA_1
182:187
LGPHQD
APC,CDC20,FZR1
0.9188
More...