DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGPHTD
Uniprot ID:
Q96L91
Source protein:
E1A-binding protein p400
Source gene:
EP400
Class:
LIG_APCC_ABBA_1
Location:
2126:2131
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9881
ASA_SCORE:
86.05
COIL:
0.826
CONS_SCORE:
0.4099
DSS_SCORE:
0.69
HELIX:
0.1087
FCONS_SCORE:
1.1935
RIG_SCORE:
0.63
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2140F
TCGA-IB-7651
PAAD
TCGA
LGPHTD
LIG_APCC_ABBA_1
0.0833
p.A2136S
DO229018
LICA
ICGC
LGPHTD
LIG_APCC_ABBA_1
0.1944
p.A2136S
DO229019
LICA
ICGC
LGPHTD
LIG_APCC_ABBA_1
0.1944
p.E2124D
DO229009
LICA
ICGC
LGPHTD
LIG_APCC_ABBA_1
0.2778
p.A2119S
DO45339
LUAD
ICGC
LGPHTD
LIG_APCC_ABBA_1
0.25
p.R2137Q
DO35442
PACA
ICGC
LGPHTD
LIG_APCC_ABBA_1
0.1667
p.W2123R
DO48547
STAD
ICGC
LGPHTD
LIG_APCC_ABBA_1
0.25
Drug responses associated with EP400 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGPHTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96L91
E1A-binding protein p400
LIG_APCC_ABBA_1
2126:2131
LGPHTD
APC,CDC20,FZR1
0.9881
More...
Q6PCB5
Lysine-specific demethylase RSBN1L
LIG_APCC_ABBA_1
719:724
LGPHTD
APC,CDC20,FZR1
0.7002
More...