DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LHLFND
Uniprot ID:
Q12774
Source protein:
Rho guanine nucleotide exchange factor 5
Source gene:
ARHGEF5
Class:
LIG_APCC_ABBA_1
Location:
1419:1424
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5856
ASA_SCORE:
14.6
COIL:
0.3832
CONS_SCORE:
0.6615
DSS_SCORE:
0.0985
HELIX:
0.0255
FCONS_SCORE:
1.3889
RIG_SCORE:
0.8965
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1412P
TCGA-06-5416
GBM
TCGA
LHLFND
LIG_APCC_ABBA_1
0.1389
p.R1410G
TCGA-22-A5C4
LUSC
TCGA
LHLFND
LIG_APCC_ABBA_1
0.0833
p.R1409Q
TCGA-AJ-A3TW
UCEC
TCGA
LHLFND
LIG_APCC_ABBA_1
0.0556
p.T1414M
TCGA-B5-A1MW
UCEC
TCGA
LHLFND
LIG_APCC_ABBA_1
0.1944
p.H1418Y
TCGA-VR-A8EY
ESCA
TCGA
LHLFND
LIG_APCC_ABBA_1
0.3056
p.R1415C
ACH-000957
Colon/Colorectal Cancer
CCLE
LHLFND
LIG_APCC_ABBA_1
0.2222
p.R1430Q
ACH-000971
Colon/Colorectal Cancer
CCLE
LHLFND
LIG_APCC_ABBA_1
0.1667
p.R1415H
SK-GT-2
stomach
COSMIC
LHLFND
LIG_APCC_ABBA_1
0.2222
Drug responses associated with ARHGEF5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LHLFND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12774
Rho guanine nucleotide exchange factor 5
LIG_APCC_ABBA_1
1419:1424
LHLFND
APC,CDC20,FZR1
0.5856
More...
Q8IW93
Rho guanine nucleotide exchange factor 19
LIG_APCC_ABBA_1
622:627
LHLFND
APC,CDC20,FZR1
0.7214
More...