DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENE
Uniprot ID:
Q6IQ26
Source protein:
DENN domain-containing protein 5A
Source gene:
DENND5A
Class:
DEG_APCC_KENBOX_2
Location:
463:467
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7918
ASA_SCORE:
86.98
COIL:
0.5298
CONS_SCORE:
0.2916
DSS_SCORE:
0.2615
HELIX:
0.4606
FCONS_SCORE:
0.9876
RIG_SCORE:
0.7954
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R471Q
TCGA-E9-A295
BRCA
TCGA
LKENE
DEG_APCC_KENBOX_2
0.2222
p.R471Q
DO3703
BRCA
ICGC
LKENE
DEG_APCC_KENBOX_2
0.2222
p.R471Q
ACH-001673
Bile Duct Cancer
CCLE
LKENE
DEG_APCC_KENBOX_2
0.2222
p.L463P
DO233671
GACA
ICGC
LKENE
DEG_APCC_KENBOX_2
0.6471
p.H467N
DO229019
LICA
ICGC
LKENE
DEG_APCC_KENBOX_2
0.7423
p.R473L
DO47407
SKCM
ICGC
LKENE
DEG_APCC_KENBOX_2
0.1667
p.F466L
DO41020
UCEC
ICGC
LKENE
DEG_APCC_KENBOX_2
0.6981
p.K477E
SIDM00907
Burkitt's Lymphoma
GDSC
LKENE
DEG_APCC_KENBOX_2
0.5
p.K477E
SIDM01257
Hepatocellular Carcinoma
GDSC
LKENE
DEG_APCC_KENBOX_2
0.5
p.K477E
SIDM00062
Hepatocellular Carcinoma
GDSC
LKENE
DEG_APCC_KENBOX_2
0.5
Drug responses associated with DENND5A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6IQ26
DENN domain-containing protein 5A
DEG_APCC_KENBOX_2
463:467
LKENE
APC,CDC20,FZR1
0.7918
More...
Q6P4F7
Rho GTPase-activating protein 11A
DEG_APCC_KENBOX_2
737:741
LKENE
APC,CDC20,FZR1
0.8239
More...