DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENE
Uniprot ID:
Q6P4F7
Source protein:
Rho GTPase-activating protein 11A
Source gene:
ARHGAP11A
Class:
DEG_APCC_KENBOX_2
Location:
737:741
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8239
ASA_SCORE:
104.7
COIL:
0.5856
CONS_SCORE:
0.2903
DSS_SCORE:
0.6663
HELIX:
0.2958
FCONS_SCORE:
1.0554
RIG_SCORE:
0.6994
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N747K
TCGA-86-7713
LUAD
TCGA
LKENE
DEG_APCC_KENBOX_2
0.1667
p.N747K
DO24712
LUAD
ICGC
LKENE
DEG_APCC_KENBOX_2
0.1667
p.G746C
TCGA-BR-7851
STAD
TCGA
LKENE
DEG_APCC_KENBOX_2
0.1944
p.G746C
DO38711
STAD
ICGC
LKENE
DEG_APCC_KENBOX_2
0.1944
p.P749Q
TCGA-D3-A3CE
SKCM
TCGA
LKENE
DEG_APCC_KENBOX_2
0.1111
p.P749Q
DO37405
SKCM
ICGC
LKENE
DEG_APCC_KENBOX_2
0.1111
p.N747Y
TCGA-D3-A8GV
SKCM
TCGA
LKENE
DEG_APCC_KENBOX_2
0.1667
p.N747Y
DO219477
SKCM
ICGC
LKENE
DEG_APCC_KENBOX_2
0.1667
p.P729T
TCGA-DU-7298
LGG
TCGA
LKENE
DEG_APCC_KENBOX_2
0.1111
p.P729T
DO22679
LGG
ICGC
LKENE
DEG_APCC_KENBOX_2
0.1111
p.N742T
SIDM00218
Thyroid Gland Carcinoma
GDSC
LKENE
DEG_APCC_KENBOX_2
0.3056
p.N742T
RO82-W-1
thyroid
COSMIC
LKENE
DEG_APCC_KENBOX_2
0.3056
p.P729S
SIDM00451
T-Lymphoblastic Leukemia
GDSC
LKENE
DEG_APCC_KENBOX_2
0.1111
p.P729S
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
LKENE
DEG_APCC_KENBOX_2
0.1111
p.F739L
ACH-000991
Colon/Colorectal Cancer
CCLE
LKENE
DEG_APCC_KENBOX_2
0.6981
p.F739L
SNU-81
large_intestine
COSMIC
LKENE
DEG_APCC_KENBOX_2
0.6981
Drug responses associated with ARHGAP11A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6IQ26
DENN domain-containing protein 5A
DEG_APCC_KENBOX_2
463:467
LKENE
APC,CDC20,FZR1
0.7918
More...
Q6P4F7
Rho GTPase-activating protein 11A
DEG_APCC_KENBOX_2
737:741
LKENE
APC,CDC20,FZR1
0.8239
More...