DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LKLYSD
Uniprot ID:
O95741
Source protein:
Copine-6
Source gene:
CPNE6
Class:
LIG_APCC_ABBA_1
Location:
46:51
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5994
ASA_SCORE:
55.6333
COIL:
0.3845
CONS_SCORE:
0.5043
DSS_SCORE:
0.0862
HELIX:
0.0082
FCONS_SCORE:
0.8504
RIG_SCORE:
0.8811
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S50Y
TCGA-86-7701
LUAD
TCGA
LKLYSD
LIG_APCC_ABBA_1
0.6009
p.S50Y
DO24441
LUAD
ICGC
LKLYSD
LIG_APCC_ABBA_1
0.6009
p.E58D
TCGA-BR-4201
STAD
TCGA
LKLYSD
LIG_APCC_ABBA_1
0.1389
p.E58D
DO38707
STAD
ICGC
LKLYSD
LIG_APCC_ABBA_1
0.1389
p.L37I
DO229257
THCA
ICGC
LKLYSD
LIG_APCC_ABBA_1
0.0833
p.D50Y
SIDM00627
Cervical Carcinoma
GDSC
LKLYSD
LIG_APCC_ABBA_1
0.7325
p.L46I
ACH-000943
Colon/Colorectal Cancer
CCLE
LKLYSD
LIG_APCC_ABBA_1
0.6063
p.L46I
RKO
large_intestine
COSMIC
LKLYSD
LIG_APCC_ABBA_1
0.6063
Drug responses associated with CPNE6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKLYSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95741
Copine-6
LIG_APCC_ABBA_1
46:51
LKLYSD
APC,CDC20,FZR1
0.5994
More...
P52948
Nuclear pore complex protein Nup98-Nup96
LIG_APCC_ABBA_1
1496:1501
LKLYSD
APC,CDC20,FZR1
0.6209
More...