DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLPTPPLS
Uniprot ID:
P04198
Source protein:
N-myc proto-oncogene protein
Source gene:
MYCN
Class:
DEG_SCF_FBW7_1
Location:
55:62
E3 ligase:
FBXW7
DEGRON score:
0.9992
ASA_SCORE:
52.1375
COIL:
0.9309
CONS_SCORE:
0.8804
DSS_SCORE:
0.4702
HELIX:
0.0241
FCONS_SCORE:
1.3418
RIG_SCORE:
0.7001
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T58M
TCGA-26-5136
GBM
TCGA
LLPTPPLS
DEG_SCF_FBW7_1
0.8534
p.T58M
DO11471
GBM
ICGC
LLPTPPLS
DEG_SCF_FBW7_1
0.8534
p.T58M
DO231615
NBL
ICGC
LLPTPPLS
DEG_SCF_FBW7_1
0.8534
p.T58K
TCGA-BG-A2L7
UCEC
TCGA
LLPTPPLS
DEG_SCF_FBW7_1
0.8417
p.T58K
DO42344
UCEC
ICGC
LLPTPPLS
DEG_SCF_FBW7_1
0.8417
p.I49M
TCGA-GC-A6I3
BLCA
TCGA
LLPTPPLS
DEG_SCF_FBW7_1
0.1667
p.I49M
DO219025
BLCA
ICGC
LLPTPPLS
DEG_SCF_FBW7_1
0.1667
p.H70L
TCGA-MN-A4N4
LUAD
TCGA
LLPTPPLS
DEG_SCF_FBW7_1
0.1111
p.H70L
DO26250
LUAD
ICGC
LLPTPPLS
DEG_SCF_FBW7_1
0.1111
p.E69K
DO50802
LIRI
ICGC
LLPTPPLS
DEG_SCF_FBW7_1
0.1389
p.H70N
DO50662
ORCA
ICGC
LLPTPPLS
DEG_SCF_FBW7_1
0.1111
p.P57H
SIDM00789
Colorectal Carcinoma
GDSC
LLPTPPLS
DEG_SCF_FBW7_1
0.6583
p.P57H
ACH-000997
Colon/Colorectal Cancer
CCLE
LLPTPPLS
DEG_SCF_FBW7_1
0.6583
p.P57H
HCT-15
large_intestine
COSMIC
LLPTPPLS
DEG_SCF_FBW7_1
0.6583
p.L61P
SIDM00901
Endometrial Carcinoma
GDSC
LLPTPPLS
DEG_SCF_FBW7_1
0.6471
p.L61P
ACH-000940
Endometrial/Uterine Cancer
CCLE
LLPTPPLS
DEG_SCF_FBW7_1
0.6471
p.L61P
AN3-CA
endometrium
COSMIC
LLPTPPLS
DEG_SCF_FBW7_1
0.6471
p.E59Q
ZR-75-30
breast
COSMIC
LLPTPPLS
DEG_SCF_FBW7_1
0.6744
p.I66F
639-V
urinary_tract
COSMIC
LLPTPPLS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with MYCN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLPTPPLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P01106
Myc proto-oncogene protein
DEG_SCF_FBW7_1
55:62
LLPTPPLS
FBXW7
0.9991
More...
P04198
N-myc proto-oncogene protein
DEG_SCF_FBW7_1
55:62
LLPTPPLS
FBXW7
0.9992
More...