DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLTPEAS
Uniprot ID:
Q8IUM7
Source protein:
Neuronal PAS domain-containing protein 4
Source gene:
NPAS4
Class:
DEG_SCF_FBW7_1
Location:
609:615
E3 ligase:
FBXW7
DEGRON score:
0.9973
ASA_SCORE:
68.2714
COIL:
0.9284
CONS_SCORE:
0.588
DSS_SCORE:
0.3617
HELIX:
0.0326
FCONS_SCORE:
1.2305
RIG_SCORE:
0.7185
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P616L
TCGA-EE-A180
SKCM
TCGA
LLTPEAS
DEG_SCF_FBW7_1
0.3056
p.P616L
DO47537
SKCM
ICGC
LLTPEAS
DEG_SCF_FBW7_1
0.3056
p.L609M
DO234199
ESAD
ICGC
LLTPEAS
DEG_SCF_FBW7_1
0.5999
p.P612T
ACH-000278
Ovarian Cancer
CCLE
LLTPEAS
DEG_SCF_FBW7_1
0.7031
Drug responses associated with NPAS4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLTPEAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IUM7
Neuronal PAS domain-containing protein 4
DEG_SCF_FBW7_1
609:615
LLTPEAS
FBXW7
0.9973
More...
Q8N9H9
Uncharacterized protein C1orf127
DEG_SCF_FBW7_1
550:556
LLTPEAS
FBXW7
0.9737
More...