DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LNPFGD
Uniprot ID:
O60481
Source protein:
Zinc finger protein ZIC 3
Source gene:
ZIC3
Class:
LIG_APCC_ABBA_1
Location:
37:42
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8678
ASA_SCORE:
48.0167
COIL:
0.8113
CONS_SCORE:
0.435
DSS_SCORE:
0.5068
HELIX:
0.1135
FCONS_SCORE:
1.0846
RIG_SCORE:
0.6489
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N29K
TCGA-34-5232
LUSC
TCGA
LNPFGD
LIG_APCC_ABBA_1
0.1111
p.N29K
DO27168
LUSC
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.1111
p.R30S
TCGA-34-5232
LUSC
TCGA
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.R30S
DO27168
LUSC
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.P32L
TCGA-A5-A1OF
UCEC
TCGA
LNPFGD
LIG_APCC_ABBA_1
0.1944
p.P32L
DO42568
UCEC
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.1944
p.G41R
TCGA-EC-A24G
UCEC
TCGA
LNPFGD
LIG_APCC_ABBA_1
0.6457
p.G41R
DO40996
UCEC
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.6457
p.R30C
TCGA-FI-A2D0
UCEC
TCGA
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.R30C
DO43891
UCEC
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.A33V
DO224987
BRCA
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.2222
p.A33V
DO229489
LAML
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.2222
p.R30H
DO44095
COAD
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.A52T
DO42673
UCEC
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.0556
p.A52T
ACH-000988
Endometrial/Uterine Cancer
CCLE
LNPFGD
LIG_APCC_ABBA_1
0.0556
p.A33S
SIDM01133
Other Solid Cancers
GDSC
LNPFGD
LIG_APCC_ABBA_1
0.2222
p.A33S
ACH-002177
Lung Cancer
CCLE
LNPFGD
LIG_APCC_ABBA_1
0.2222
p.A51T
ACH-001669
Leukemia
CCLE
LNPFGD
LIG_APCC_ABBA_1
0.0833
p.A52P
ACH-001669
Leukemia
CCLE
LNPFGD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with ZIC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNPFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60481
Zinc finger protein ZIC 3
LIG_APCC_ABBA_1
37:42
LNPFGD
APC,CDC20,FZR1
0.8678
More...
Q8NDI1
EH domain-binding protein 1
LIG_APCC_ABBA_1
278:283
LNPFGD
APC,CDC20,FZR1
0.998
More...