DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LNPFGD
Uniprot ID:
Q8NDI1
Source protein:
EH domain-binding protein 1
Source gene:
EHBP1
Class:
LIG_APCC_ABBA_1
Location:
278:283
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.998
ASA_SCORE:
68.45
COIL:
0.9007
CONS_SCORE:
0.3882
DSS_SCORE:
0.8013
HELIX:
0.0512
FCONS_SCORE:
1.1392
RIG_SCORE:
0.6215
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E292K
TCGA-EL-A3CT
THCA
TCGA
LNPFGD
LIG_APCC_ABBA_1
0.0833
p.E292K
DO48113
THCA
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.0833
p.P269S
TCGA-FS-A1Z3
SKCM
TCGA
LNPFGD
LIG_APCC_ABBA_1
0.0833
p.P269S
DO37635
SKCM
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.0833
p.P273S
TCGA-W3-AA1V
SKCM
TCGA
LNPFGD
LIG_APCC_ABBA_1
0.1944
p.P273S
DO230529
LUSC
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.1944
p.P273S
DO51276
SKCM
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.1944
p.P269L
DO220877
MELA
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.0833
p.P280L
DO220886
MELA
ICGC
LNPFGD
LIG_APCC_ABBA_1
0.6471
p.A275V
SIDM01088
Endometrial Carcinoma
GDSC
LNPFGD
LIG_APCC_ABBA_1
0.25
p.A275V
ACH-000965
Endometrial/Uterine Cancer
CCLE
LNPFGD
LIG_APCC_ABBA_1
0.25
p.A275V
RL95-2
endometrium
COSMIC
LNPFGD
LIG_APCC_ABBA_1
0.25
p.D274V
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
LNPFGD
LIG_APCC_ABBA_1
0.2222
p.D274V
ACH-000951
Lung Cancer
CCLE
LNPFGD
LIG_APCC_ABBA_1
0.2222
p.D274V
NCI-H2342
lung
COSMIC
LNPFGD
LIG_APCC_ABBA_1
0.2222
p.D271N
SIDM00241
Breast Carcinoma
GDSC
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.D271N
ACH-002179
Breast Cancer
CCLE
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.D271N
OCUB-M
breast
COSMIC
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.N268Y
SIDM01710
Squamous Cell Lung Carcinoma
GDSC
LNPFGD
LIG_APCC_ABBA_1
0.0556
p.I290V
ACH-001380
Pancreatic Cancer
CCLE
LNPFGD
LIG_APCC_ABBA_1
0.1389
p.N271K
KELLY
autonomic_ganglia
COSMIC
LNPFGD
LIG_APCC_ABBA_1
0.1389
Drug responses associated with EHBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNPFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60481
Zinc finger protein ZIC 3
LIG_APCC_ABBA_1
37:42
LNPFGD
APC,CDC20,FZR1
0.8678
More...
Q8NDI1
EH domain-binding protein 1
LIG_APCC_ABBA_1
278:283
LNPFGD
APC,CDC20,FZR1
0.998
More...