DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPPFPD
Uniprot ID:
P55001
Source protein:
Microfibrillar-associated protein 2
Source gene:
MFAP2
Class:
LIG_APCC_ABBA_1
Location:
26:31
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9957
ASA_SCORE:
69.6
COIL:
0.927
CONS_SCORE:
0.5794
DSS_SCORE:
0.3919
HELIX:
0.0358
FCONS_SCORE:
0.8076
RIG_SCORE:
0.7127
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H37Q
TCGA-61-2613
OV
TCGA
LPPFPD
LIG_APCC_ABBA_1
0.1667
p.D40N
TCGA-AZ-4315
COAD
TCGA
LPPFPD
LIG_APCC_ABBA_1
0.0833
p.D40E
TCGA-BP-5174
KIRC
TCGA
LPPFPD
LIG_APCC_ABBA_1
0.0833
p.L23P
TCGA-LG-A6GG
LIHC
TCGA
LPPFPD
LIG_APCC_ABBA_1
0.25
p.L23P
DO49699
LIHC
ICGC
LPPFPD
LIG_APCC_ABBA_1
0.25
p.V33I
TCGA-UY-A9PF
BLCA
TCGA
LPPFPD
LIG_APCC_ABBA_1
0.2778
p.V33I
DO219044
BLCA
ICGC
LPPFPD
LIG_APCC_ABBA_1
0.2778
p.Q33P
DO228483
BRCA
ICGC
LPPFPD
LIG_APCC_ABBA_1
0.2778
p.D39N
DO8842
COAD
ICGC
LPPFPD
LIG_APCC_ABBA_1
0.1111
p.D39E
DO18212
KIRC
ICGC
LPPFPD
LIG_APCC_ABBA_1
0.1111
p.Q33K
DO229041
LICA
ICGC
LPPFPD
LIG_APCC_ABBA_1
0.2778
p.H36Q
DO28773
OV
ICGC
LPPFPD
LIG_APCC_ABBA_1
0.1944
p.P27S
SIDM00389
B-Cell Non-Hodgkin's Lymphoma
GDSC
LPPFPD
LIG_APCC_ABBA_1
0.5641
p.P27S
SU-DHL-10
haematopoietic_and_lymphoid_tissue
COSMIC
LPPFPD
LIG_APCC_ABBA_1
0.5641
p.Q34P
SIDM00251
Gastric Carcinoma
GDSC
LPPFPD
LIG_APCC_ABBA_1
0.25
p.Q34P
SIDM00609
Kidney Carcinoma
GDSC
LPPFPD
LIG_APCC_ABBA_1
0.25
p.Q34P
SIDM00167
Head and Neck Carcinoma
GDSC
LPPFPD
LIG_APCC_ABBA_1
0.25
p.P26S
SU-DHL-10
haematopoietic_and_lymphoid_tissue
COSMIC
LPPFPD
LIG_APCC_ABBA_1
0.6752
Drug responses associated with MFAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPFPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55001
Microfibrillar-associated protein 2
LIG_APCC_ABBA_1
26:31
LPPFPD
APC,CDC20,FZR1
0.9957
More...
Q8N9B5
Junction-mediating and -regulatory protein
LIG_APCC_ABBA_1
913:918
LPPFPD
APC,CDC20,FZR1
0.8809
More...