DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPPTPAPT
Uniprot ID:
Q9NP71
Source protein:
Carbohydrate-responsive element-binding protein
Source gene:
MLXIPL
Class:
DEG_SCF_FBW7_1
Location:
569:576
E3 ligase:
FBXW7
DEGRON score:
0.8802
ASA_SCORE:
94.4375
COIL:
0.9773
CONS_SCORE:
0.4169
DSS_SCORE:
0.6841
HELIX:
0.0058
FCONS_SCORE:
0.9874
RIG_SCORE:
0.5804
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R579W
TCGA-06-0649
GBM
TCGA
LPPTPAPT
DEG_SCF_FBW7_1
0.25
p.R579W
DO11142
GBM
ICGC
LPPTPAPT
DEG_SCF_FBW7_1
0.25
p.P571S
TCGA-14-1450
GBM
TCGA
LPPTPAPT
DEG_SCF_FBW7_1
0.5641
p.P571S
DO13270
GBM
ICGC
LPPTPAPT
DEG_SCF_FBW7_1
0.5641
p.P570R
TCGA-77-8144
LUSC
TCGA
LPPTPAPT
DEG_SCF_FBW7_1
0.6401
p.P570R
DO26949
LUSC
ICGC
LPPTPAPT
DEG_SCF_FBW7_1
0.6401
p.P570S
TCGA-BS-A0UV
UCEC
TCGA
LPPTPAPT
DEG_SCF_FBW7_1
0.5641
p.P570S
DO42793
UCEC
ICGC
LPPTPAPT
DEG_SCF_FBW7_1
0.5641
p.G583C
DO230342
COCA
ICGC
LPPTPAPT
DEG_SCF_FBW7_1
0.1389
p.P570L
DO220873
MELA
ICGC
LPPTPAPT
DEG_SCF_FBW7_1
0.6471
p.P570L
DO46838
RECA
ICGC
LPPTPAPT
DEG_SCF_FBW7_1
0.6471
p.T572P
DO227681
SKCA
ICGC
LPPTPAPT
DEG_SCF_FBW7_1
0.7031
p.L569P
SIDM00285
Neuroblastoma
GDSC
LPPTPAPT
DEG_SCF_FBW7_1
0.6471
p.C566S
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
LPPTPAPT
DEG_SCF_FBW7_1
0.25
p.C566S
ACH-000945
Lung Cancer
CCLE
LPPTPAPT
DEG_SCF_FBW7_1
0.25
p.C566S
NCI-H650
lung
COSMIC
LPPTPAPT
DEG_SCF_FBW7_1
0.25
p.T572N
SIDM01107
Melanoma
GDSC
LPPTPAPT
DEG_SCF_FBW7_1
0.7055
p.A563T
EFO-27
ovary
COSMIC
LPPTPAPT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with MLXIPL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPTPAPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13118
Krueppel-like factor 10
DEG_SCF_FBW7_1
472:479
LPPTPAPT
FBXW7
0.9926
More...
Q9NP71
Carbohydrate-responsive element-binding protein
DEG_SCF_FBW7_1
569:576
LPPTPAPT
FBXW7
0.8802
More...