DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LPPYPE
Uniprot ID:
Q9H0K4
Source protein:
Radial spoke head protein 6 homolog A
Source gene:
RSPH6A
Class:
LIG_APCC_ABBA_1
Location:
4:9
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9572
ASA_SCORE:
108.3167
COIL:
0.9768
CONS_SCORE:
0.1536
DSS_SCORE:
0.9781
HELIX:
0.0132
FCONS_SCORE:
1.0796
RIG_SCORE:
0.6147
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R10C
TCGA-AJ-A3BG
UCEC
TCGA
LPPYPE
LIG_APCC_ABBA_1
0.3056
p.R10C
DO42633
UCEC
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.3056
p.R10H
TCGA-AP-A1DR
UCEC
TCGA
LPPYPE
LIG_APCC_ABBA_1
0.3056
p.R10H
DO43747
UCEC
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.3056
p.P8H
TCGA-AX-A2HD
UCEC
TCGA
LPPYPE
LIG_APCC_ABBA_1
0.6583
p.P8H
DO42608
UCEC
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.6583
p.P16S
TCGA-D3-A51G
SKCM
TCGA
LPPYPE
LIG_APCC_ABBA_1
0.1389
p.P16S
DO47700
SKCM
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.1389
p.R19G
TCGA-FI-A2D0
UCEC
TCGA
LPPYPE
LIG_APCC_ABBA_1
0.0556
p.R19G
DO43891
UCEC
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.0556
p.R18Q
TCGA-HU-A4H4
STAD
TCGA
LPPYPE
LIG_APCC_ABBA_1
0.0833
p.R18Q
DO47721
STAD
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.0833
p.A8V
DO234304
ESAD
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.6936
p.A8V
DO233647
GACA
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.6936
p.Q2R
DO23108
LINC
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.2778
p.Q2R
DO45041
LINC
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.2778
p.Q11H
DO26488
LUSC
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.2778
p.A13P
DO26647
LUSC
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.2222
p.T4I
DO37819
SKCM
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.7078
p.R19K
DO229253
THCA
ICGC
LPPYPE
LIG_APCC_ABBA_1
0.0556
p.P5S
SIDM00217
Colorectal Carcinoma
GDSC
LPPYPE
LIG_APCC_ABBA_1
0.5641
p.P5S
ACH-000999
Colon/Colorectal Cancer
CCLE
LPPYPE
LIG_APCC_ABBA_1
0.5641
p.P5S
SNU-1040
large_intestine
COSMIC
LPPYPE
LIG_APCC_ABBA_1
0.5641
p.R17G
YT
haematopoietic_and_lymphoid_tissue
COSMIC
LPPYPE
LIG_APCC_ABBA_1
0.1111
p.M7R
PC-14
lung
COSMIC
LPPYPE
LIG_APCC_ABBA_1
0.8632
p.G19R
SW684
soft_tissue
COSMIC
LPPYPE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with RSPH6A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPYPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZMS7
Zinc finger protein 783
LIG_APCC_ABBA_1
226:231
LPPYPE
APC,CDC20,FZR1
0.9491
More...
Q9H0K4
Radial spoke head protein 6 homolog A
LIG_APCC_ABBA_1
4:9
LPPYPE
APC,CDC20,FZR1
0.9572
More...