DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQQTPPCS
Uniprot ID:
Q9HBU9
Source protein:
Popeye domain-containing protein 2
Source gene:
POPDC2
Class:
DEG_SCF_FBW7_1
Location:
304:311
E3 ligase:
FBXW7
DEGRON score:
0.7425
ASA_SCORE:
92.2875
COIL:
0.9133
CONS_SCORE:
0.2883
DSS_SCORE:
0.7611
HELIX:
0.069
FCONS_SCORE:
1.0107
RIG_SCORE:
0.5938
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q298E
TCGA-CN-6013
HNSC
TCGA
LQQTPPCS
DEG_SCF_FBW7_1
0.1667
p.Q298E
DO15975
HNSC
ICGC
LQQTPPCS
DEG_SCF_FBW7_1
0.1667
p.P308L
TCGA-EE-A29L
SKCM
TCGA
LQQTPPCS
DEG_SCF_FBW7_1
0.7582
p.P308L
DO222599
MELA
ICGC
LQQTPPCS
DEG_SCF_FBW7_1
0.7582
p.P308L
DO37835
SKCM
ICGC
LQQTPPCS
DEG_SCF_FBW7_1
0.7582
p.P297H
DO229031
LICA
ICGC
LQQTPPCS
DEG_SCF_FBW7_1
0.1389
p.A321E
DO229035
LICA
ICGC
LQQTPPCS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with POPDC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQQTPPCS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HBU9
Popeye domain-containing protein 2
DEG_SCF_FBW7_1
304:311
LQQTPPCS
FBXW7
0.7425
More...
Q68CR7
Leucine-rich repeat-containing protein 66
DEG_SCF_FBW7_1
852:859
LQQTPPCS
FBXW7
0.9839
More...