DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LQRGR
Uniprot ID:
Q8NCW6
Source protein:
Polypeptide N-acetylgalactosaminyltransferase 11
Source gene:
GALNT11
Class:
SCF_FBXL2
Location:
480:484
E3 ligase:
FBXL2
DEGRON score:
0.6683
ASA_SCORE:
62.56
COIL:
0.2262
CONS_SCORE:
0.5033
DSS_SCORE:
0.5313
HELIX:
0.0058
FCONS_SCORE:
1.053
RIG_SCORE:
0.7652
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R482L
TCGA-17-Z052
LUAD
TCGA
LQRGR
SCF_FBXL2
0.8428
p.K492R
TCGA-AA-3811
COAD
TCGA
LQRGR
SCF_FBXL2
0.2222
p.K492R
DO7962
COAD
ICGC
LQRGR
SCF_FBXL2
0.2222
p.G473V
DO228948
LICA
ICGC
LQRGR
SCF_FBXL2
0.1389
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Drug responses associated with GALNT11 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LQRGR
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23497
Nuclear autoantigen Sp-100
SCF_FBXL2
546:550
LQRGR
FBXL2
0.9907
More...
Q8NCW6
Polypeptide N-acetylgalactosaminyltransferase 11
SCF_FBXL2
480:484
LQRGR
FBXL2
0.6683
More...
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