DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRELLTTMG
Uniprot ID:
O14950
Source protein:
Myosin regulatory light chain 12B
Source gene:
MYL12B
Class:
DEG_APCC_DBOX_1
Location:
123:131
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5256
ASA_SCORE:
46.5333
COIL:
0.256
CONS_SCORE:
0.7186
DSS_SCORE:
0.3323
HELIX:
0.7359
FCONS_SCORE:
1.1166
RIG_SCORE:
0.8481
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M130I
TCGA-17-Z062
LUAD
TCGA
LRELLTTMG
DEG_APCC_DBOX_1
0.6507
p.M130I
DO229037
LICA
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.6507
p.T129I
TCGA-AX-A06F
UCEC
TCGA
LRELLTTMG
DEG_APCC_DBOX_1
0.5966
p.T129I
DO41752
UCEC
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.5966
p.D136Y
TCGA-B8-A54K
KIRC
TCGA
LRELLTTMG
DEG_APCC_DBOX_1
0.1944
p.D136Y
DO219234
KIRC
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.1944
p.L127P
TCGA-BR-8487
STAD
TCGA
LRELLTTMG
DEG_APCC_DBOX_1
0.7582
p.L127P
DO47867
STAD
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.7582
p.F134L
TCGA-EE-A3J5
SKCM
TCGA
LRELLTTMG
DEG_APCC_DBOX_1
0.25
p.F134L
DO220878
MELA
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.25
p.F134L
DO47331
SKCM
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.25
p.R124I
TCGA-GN-A265
SKCM
TCGA
LRELLTTMG
DEG_APCC_DBOX_1
0.8102
p.R124I
DO37491
SKCM
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.8102
p.D121Y
DO229028
LICA
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.2778
p.G116V
DO229037
LICA
ICGC
LRELLTTMG
DEG_APCC_DBOX_1
0.1389
Drug responses associated with MYL12B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRELLTTMG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14950
Myosin regulatory light chain 12B
DEG_APCC_DBOX_1
123:131
LRELLTTMG
APC,CDC20,FZR1
0.5256
More...
P24844
Myosin regulatory light polypeptide 9
DEG_APCC_DBOX_1
123:131
LRELLTTMG
APC,CDC20,FZR1
0.7085
More...