DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSLFGD
Uniprot ID:
Q9P1Y6
Source protein:
PHD and RING finger domain-containing protein 1
Source gene:
PHRF1
Class:
LIG_APCC_ABBA_1
Location:
431:436
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7746
ASA_SCORE:
59.1833
COIL:
0.6748
CONS_SCORE:
0.6335
DSS_SCORE:
0.2042
HELIX:
0.163
FCONS_SCORE:
1.3697
RIG_SCORE:
0.7373
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S431F
DO474
BLCA
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.7982
p.L432M
DO50458
KIRC
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.711
p.S432F
TCGA-MV-A51V
BLCA
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.6871
p.L432V
DO14910
HNSC
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.6765
p.L433M
TCGA-A3-A6NL
KIRC
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.5999
p.L433V
TCGA-CX-7219
HNSC
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.5654
p.S430C
TCGA-FU-A3HY
CESC
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.3056
p.A429D
TCGA-UD-AAC5
MESO
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.2778
p.S429C
DO6284
CESC
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.2778
p.G427V
TCGA-3B-A9I1
SARC
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.2222
p.G426V
DO219941
SARC
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.1944
p.P441L
DO229459
SKCA
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.1944
p.A424V
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LSLFGD
LIG_APCC_ABBA_1
0.1389
p.A424V
ACH-000995
Leukemia
CCLE
LSLFGD
LIG_APCC_ABBA_1
0.1389
p.A424V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LSLFGD
LIG_APCC_ABBA_1
0.1389
p.R423K
SIDM00952
B-Cell Non-Hodgkin's Lymphoma
GDSC
LSLFGD
LIG_APCC_ABBA_1
0.1111
p.R423K
ACH-002220
Lymphoma
CCLE
LSLFGD
LIG_APCC_ABBA_1
0.1111
p.R423K
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
LSLFGD
LIG_APCC_ABBA_1
0.1111
p.A423V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LSLFGD
LIG_APCC_ABBA_1
0.1111
p.R422K
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
LSLFGD
LIG_APCC_ABBA_1
0.0833
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Drug responses associated with PHRF1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LSLFGD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N9Z9
Lamin tail domain-containing protein 1
LIG_APCC_ABBA_1
107:112
LSLFGD
APC,CDC20,FZR1
0.9557
More...
Q9P1Y6
PHD and RING finger domain-containing protein 1
LIG_APCC_ABBA_1
431:436
LSLFGD
APC,CDC20,FZR1
0.7746
More...
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