DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSLFGD
Uniprot ID:
Q9P1Y6
Source protein:
PHD and RING finger domain-containing protein 1
Source gene:
PHRF1
Class:
LIG_APCC_ABBA_1
Location:
431:436
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7746
ASA_SCORE:
59.1833
COIL:
0.6748
CONS_SCORE:
0.6335
DSS_SCORE:
0.2042
HELIX:
0.163
FCONS_SCORE:
1.3697
RIG_SCORE:
0.7373
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G427V
TCGA-3B-A9I1
SARC
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.2222
p.L433M
TCGA-A3-A6NL
KIRC
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.5999
p.L433V
TCGA-CX-7219
HNSC
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.5654
p.S430C
TCGA-FU-A3HY
CESC
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.3056
p.S432F
TCGA-MV-A51V
BLCA
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.6871
p.A429D
TCGA-UD-AAC5
MESO
TCGA
LSLFGD
LIG_APCC_ABBA_1
0.2778
p.S431F
DO474
BLCA
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.7982
p.S429C
DO6284
CESC
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.2778
p.L432V
DO14910
HNSC
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.6765
p.L432M
DO50458
KIRC
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.711
p.G426V
DO219941
SARC
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.1944
p.P441L
DO229459
SKCA
ICGC
LSLFGD
LIG_APCC_ABBA_1
0.1944
p.A424V
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LSLFGD
LIG_APCC_ABBA_1
0.1389
p.A424V
ACH-000995
Leukemia
CCLE
LSLFGD
LIG_APCC_ABBA_1
0.1389
p.A424V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LSLFGD
LIG_APCC_ABBA_1
0.1389
p.R423K
SIDM00952
B-Cell Non-Hodgkin's Lymphoma
GDSC
LSLFGD
LIG_APCC_ABBA_1
0.1111
p.R423K
ACH-002220
Lymphoma
CCLE
LSLFGD
LIG_APCC_ABBA_1
0.1111
p.R423K
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
LSLFGD
LIG_APCC_ABBA_1
0.1111
p.R422K
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
LSLFGD
LIG_APCC_ABBA_1
0.0833
p.A423V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LSLFGD
LIG_APCC_ABBA_1
0.1111
Drug responses associated with PHRF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSLFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P1Y6
PHD and RING finger domain-containing protein 1
LIG_APCC_ABBA_1
431:436
LSLFGD
APC,CDC20,FZR1
0.7746
More...
Q8N9Z9
Lamin tail domain-containing protein 1
LIG_APCC_ABBA_1
107:112
LSLFGD
APC,CDC20,FZR1
0.9557
More...