DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPAMS
Uniprot ID:
O15230
Source protein:
Laminin subunit alpha-5
Source gene:
LAMA5
Class:
DEG_SCF_FBW7_1
Location:
1254:1259
E3 ligase:
FBXW7
DEGRON score:
0.5545
ASA_SCORE:
61.7
COIL:
0.7693
CONS_SCORE:
0.2166
DSS_SCORE:
0.7216
HELIX:
0.2092
FCONS_SCORE:
0.8577
RIG_SCORE:
0.6179
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1264Q
TCGA-AD-6964
COAD
TCGA
LTPAMS
DEG_SCF_FBW7_1
0.1944
p.R1264Q
DO8360
COAD
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.1944
p.R1266Q
TCGA-HT-8564
LGG
TCGA
LTPAMS
DEG_SCF_FBW7_1
0.1389
p.R1266Q
DO44623
LGG
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.1389
p.M1258T
DO229010
COCA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.6312
p.M1258T
DO229013
COCA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.6312
p.M1258T
DO229016
COCA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.6312
p.M1258T
DO229003
COCA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.6312
p.M1258T
DO229005
COCA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.6312
p.A1251T
DO50777
LICA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.25
p.A1251T
DO41199
UCEC
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.25
p.A1251T
SIDM00901
Endometrial Carcinoma
GDSC
LTPAMS
DEG_SCF_FBW7_1
0.25
p.A1251T
ACH-000940
Endometrial/Uterine Cancer
CCLE
LTPAMS
DEG_SCF_FBW7_1
0.25
p.D1253N
DO222662
MELA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.3056
p.P1265H
DO232838
NACA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.1667
p.H1250L
DO233294
NACA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.2222
p.A1251V
DO38380
STAD
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.25
p.G1245S
ACH-000706
Lung Cancer
CCLE
LTPAMS
DEG_SCF_FBW7_1
0.0833
p.R1266W
ACH-000810
Skin Cancer
CCLE
LTPAMS
DEG_SCF_FBW7_1
0.1389
p.M1258I
ACH-000866
Lung Cancer
CCLE
LTPAMS
DEG_SCF_FBW7_1
0.6507
p.P1260A
ACH-002446
Gastric Cancer
CCLE
LTPAMS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with LAMA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPAMS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15230
Laminin subunit alpha-5
DEG_SCF_FBW7_1
1254:1259
LTPAMS
FBXW7
0.5545
More...
Q9Y4D8
Probable E3 ubiquitin-protein ligase HECTD4
DEG_SCF_FBW7_1
3055:3060
LTPAMS
FBXW7
0.9647
More...