DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPAMS
Uniprot ID:
Q9Y4D8
Source protein:
Probable E3 ubiquitin-protein ligase HECTD4
Source gene:
HECTD4
Class:
DEG_SCF_FBW7_1
Location:
3055:3060
E3 ligase:
FBXW7
DEGRON score:
0.9647
ASA_SCORE:
71.9333
COIL:
0.796
CONS_SCORE:
0.41
DSS_SCORE:
0.4509
HELIX:
0.1365
FCONS_SCORE:
1.1317
RIG_SCORE:
0.6999
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A3068S
TCGA-55-A490
LUAD
TCGA
LTPAMS
DEG_SCF_FBW7_1
0.1111
p.R3046W
TCGA-EO-A22U
UCEC
TCGA
LTPAMS
DEG_SCF_FBW7_1
0.0833
p.R3046W
TCGA-WS-AB45
COAD
TCGA
LTPAMS
DEG_SCF_FBW7_1
0.0833
p.M3059I
DO219723
CESC
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.6507
p.T3056P
DO222571
COCA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.7031
p.S3060R
DO229031
LICA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.7427
p.A3063P
DO26772
LUSC
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.25
p.Q3069H
DO50733
ORCA
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.0833
p.A3063T
DO37839
SKCM
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.25
p.P3057T
DO37405
SKCM
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.7031
p.S3066F
DO48665
SKCM
ICGC
LTPAMS
DEG_SCF_FBW7_1
0.1667
p.A3059V
SIDM00225
Melanoma
GDSC
LTPAMS
DEG_SCF_FBW7_1
0.6936
p.A3059V
IST-MEL1
skin
COSMIC
LTPAMS
DEG_SCF_FBW7_1
0.6936
p.P3061S
ACH-000945
Lung Cancer
CCLE
LTPAMS
DEG_SCF_FBW7_1
0.3056
p.A3061T
NCI-SNU-5
stomach
COSMIC
LTPAMS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with HECTD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPAMS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15230
Laminin subunit alpha-5
DEG_SCF_FBW7_1
1254:1259
LTPAMS
FBXW7
0.5545
More...
Q9Y4D8
Probable E3 ubiquitin-protein ligase HECTD4
DEG_SCF_FBW7_1
3055:3060
LTPAMS
FBXW7
0.9647
More...