DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPGGS
Uniprot ID:
Q9H222
Source protein:
ATP-binding cassette sub-family G member 5
Source gene:
ABCG5
Class:
DEG_SCF_FBW7_1
Location:
7:12
E3 ligase:
FBXW7
DEGRON score:
0.9976
ASA_SCORE:
72.35
COIL:
0.9372
CONS_SCORE:
0.2462
DSS_SCORE:
0.6727
HELIX:
0.0362
FCONS_SCORE:
1.0013
RIG_SCORE:
0.6153
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D3N
TCGA-14-1795
GBM
TCGA
LTPGGS
DEG_SCF_FBW7_1
0.2222
p.D3N
DO13114
GBM
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.2222
p.G14C
TCGA-AX-A1C5
UCEC
TCGA
LTPGGS
DEG_SCF_FBW7_1
0.2778
p.G14C
DO41422
UCEC
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.2778
p.G10R
TCGA-DM-A1D7
COAD
TCGA
LTPGGS
DEG_SCF_FBW7_1
0.6457
p.G10R
TCGA-HU-A4GH
STAD
TCGA
LTPGGS
DEG_SCF_FBW7_1
0.6457
p.G10R
DO10044
COAD
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.6457
p.G10R
DO47743
STAD
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.6457
p.G2C
TCGA-G9-6351
PRAD
TCGA
LTPGGS
DEG_SCF_FBW7_1
0.6389
p.G2C
DO36325
PRAD
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.6389
p.M13I
TCGA-WE-A8ZX
SKCM
TCGA
LTPGGS
DEG_SCF_FBW7_1
0.3056
p.M13I
DO51291
SKCM
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.3056
p.M13I
SIDM01247
Burkitt's Lymphoma
GDSC
LTPGGS
DEG_SCF_FBW7_1
0.3056
p.M13I
SIDM00779
Colorectal Carcinoma
GDSC
LTPGGS
DEG_SCF_FBW7_1
0.3056
p.M13I
Ramos-2G6-4C10
haematopoietic_and_lymphoid_tissue
COSMIC
LTPGGS
DEG_SCF_FBW7_1
0.3056
p.M13I
NCI-H716
large_intestine
COSMIC
LTPGGS
DEG_SCF_FBW7_1
0.3056
p.L4I
TCGA-WS-AB45
COAD
TCGA
LTPGGS
DEG_SCF_FBW7_1
0.25
p.L4I
DO51734
COAD
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.25
p.G11R
DO222892
BTCA
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.6457
p.R11W
DO227802
COCA
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.8634
p.N18I
DO234333
ESAD
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.1667
p.F4L
DO220845
MELA
ICGC
LTPGGS
DEG_SCF_FBW7_1
0.25
Drug responses associated with ABCG5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPGGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86YW9
Mediator of RNA polymerase II transcription subunit 12-like protein
DEG_SCF_FBW7_1
1832:1837
LTPGGS
FBXW7
0.997
More...
Q9H222
ATP-binding cassette sub-family G member 5
DEG_SCF_FBW7_1
7:12
LTPGGS
FBXW7
0.9976
More...