DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPLEE
Uniprot ID:
Q8NG31
Source protein:
Kinetochore scaffold 1
Source gene:
KNL1
Class:
DEG_SCF_FBW7_2
Location:
1041:1046
E3 ligase:
FBXW7
DEGRON score:
0.7368
ASA_SCORE:
86.8333
COIL:
0.6018
CONS_SCORE:
0.2704
DSS_SCORE:
0.5335
HELIX:
0.281
FCONS_SCORE:
0.8785
RIG_SCORE:
0.7538
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1039N
SIDM00412
B-Cell Non-Hodgkin's Lymphoma
GDSC
LTPLEE
DEG_SCF_FBW7_2
0.7222
p.S1039N
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
LTPLEE
DEG_SCF_FBW7_2
0.7222
p.L1034P
SIDM01560
Rhabdomyosarcoma
GDSC
LTPLEE
DEG_SCF_FBW7_2
0.1389
p.V1035I
SIDM01343
Gastric Carcinoma
GDSC
LTPLEE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with KNL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPLEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NG31
Kinetochore scaffold 1
DEG_SCF_FBW7_2
1041:1046
LTPLEE
FBXW7
0.7368
More...
Q9Y2B5
VPS9 domain-containing protein 1
DEG_SCF_FBW7_2
146:151
LTPLEE
FBXW7
0.9915
More...