DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPLGS
Uniprot ID:
Q16612
Source protein:
Neuronal regeneration-related protein
Source gene:
NREP
Class:
DEG_SCF_FBW7_1
Location:
49:54
E3 ligase:
FBXW7
DEGRON score:
0.8141
ASA_SCORE:
46.9833
COIL:
0.6787
CONS_SCORE:
0.6837
DSS_SCORE:
0.511
HELIX:
0.0373
FCONS_SCORE:
1.0216
RIG_SCORE:
0.6946
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y47S
TCGA-DK-AA77
BLCA
TCGA
LTPLGS
DEG_SCF_FBW7_1
0.2778
p.Y48S
TCGA-FI-A2D5
UCEC
TCGA
LTPLGS
DEG_SCF_FBW7_1
0.3056
p.E43G
DO229010
COCA
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1667
p.E43G
DO229013
COCA
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1667
p.E43G
DO229005
COCA
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1667
p.E43G
DO228947
LICA
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1667
p.E43G
DO52365
LUSC
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1667
p.R58C
DO14338
HNSC
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.2222
p.R58L
DO229015
LICA
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.2222
p.L43Q
DO23302
LINC
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1667
p.G53S
DO37655
SKCM
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.5882
p.D42N
DO37814
SKCM
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1389
p.R61K
DO43186
UCEC
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1389
p.R61I
DO43154
UCEC
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.1389
p.G53D
DO42568
UCEC
ICGC
LTPLGS
DEG_SCF_FBW7_1
0.6087
p.V46G
SIDM01018
Hodgkin's Lymphoma
GDSC
LTPLGS
DEG_SCF_FBW7_1
0.25
p.V46G
KM-H2
haematopoietic_and_lymphoid_tissue
COSMIC
LTPLGS
DEG_SCF_FBW7_1
0.25
p.R58H
ACH-000943
Colon/Colorectal Cancer
CCLE
LTPLGS
DEG_SCF_FBW7_1
0.2222
p.R58H
RKO
large_intestine
COSMIC
LTPLGS
DEG_SCF_FBW7_1
0.2222
p.R58S
ACH-000943
Colon/Colorectal Cancer
CCLE
LTPLGS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with NREP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPLGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13332
Receptor-type tyrosine-protein phosphatase S
DEG_SCF_FBW7_1
1170:1175
LTPLGS
FBXW7
0.9627
More...
Q16612
Neuronal regeneration-related protein
DEG_SCF_FBW7_1
49:54
LTPLGS
FBXW7
0.8141
More...