DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPPST
Uniprot ID:
Q86X29
Source protein:
Lipolysis-stimulated lipoprotein receptor
Source gene:
LSR
Class:
DEG_SCF_FBW7_1
Location:
500:505
E3 ligase:
FBXW7
DEGRON score:
0.9895
ASA_SCORE:
80.95
COIL:
0.9257
CONS_SCORE:
0.3366
DSS_SCORE:
0.7252
HELIX:
0.0613
FCONS_SCORE:
0.5954
RIG_SCORE:
0.615
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S510G
TCGA-EB-A85I
SKCM
TCGA
LTPPST
DEG_SCF_FBW7_1
0.6389
p.R510S
DO9708
COAD
ICGC
LTPPST
DEG_SCF_FBW7_1
0.6389
p.P507L
DO48290
ESCA
ICGC
LTPPST
DEG_SCF_FBW7_1
0.2778
p.G498A
DO228807
LICA
ICGC
LTPPST
DEG_SCF_FBW7_1
0.2778
p.R508W
DO25847
LUAD
ICGC
LTPPST
DEG_SCF_FBW7_1
0.6944
p.Y504N
DO228568
MALY
ICGC
LTPPST
DEG_SCF_FBW7_1
0.7059
p.S491G
DO50296
SKCM
ICGC
LTPPST
DEG_SCF_FBW7_1
0.0833
p.T505S
SIDM01233
Colorectal Carcinoma
GDSC
LTPPST
DEG_SCF_FBW7_1
0.7116
p.T505S
ACH-000003
CCLE
LTPPST
DEG_SCF_FBW7_1
0.7116
p.T505S
ACH-000009
Colon/Colorectal Cancer
CCLE
LTPPST
DEG_SCF_FBW7_1
0.7116
p.P503L
SIDM00153
T-Lymphoblastic Leukemia
GDSC
LTPPST
DEG_SCF_FBW7_1
0.6471
p.P503L
ACH-000964
Leukemia
CCLE
LTPPST
DEG_SCF_FBW7_1
0.6471
p.T501P
ACH-000703
Lung Cancer
CCLE
LTPPST
DEG_SCF_FBW7_1
0.8142
p.E507K
ACH-001608
Brain Cancer
CCLE
LTPPST
DEG_SCF_FBW7_1
0.2778
Drug responses associated with LSR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPPST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86X29
Lipolysis-stimulated lipoprotein receptor
DEG_SCF_FBW7_1
500:505
LTPPST
FBXW7
0.9895
More...
Q8IUM7
Neuronal PAS domain-containing protein 4
DEG_SCF_FBW7_1
531:536
LTPPST
FBXW7
0.9958
More...