DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPQPT
Uniprot ID:
Q96JP9
Source protein:
Cadherin-related family member 1
Source gene:
CDHR1
Class:
DEG_SCF_FBW7_1
Location:
818:823
E3 ligase:
FBXW7
DEGRON score:
0.946
ASA_SCORE:
79.65
COIL:
0.8793
CONS_SCORE:
0.576
DSS_SCORE:
0.7481
HELIX:
0.0348
FCONS_SCORE:
0.9578
RIG_SCORE:
0.5837
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G833R
TCGA-21-1079
LUSC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.0556
p.G833R
DO26846
LUSC
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.0556
p.V814I
TCGA-B5-A3FC
UCEC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.2222
p.V814I
TCGA-CQ-7064
HNSC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.2222
p.P820L
TCGA-D1-A103
UCEC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.7582
p.P820L
DO42312
UCEC
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.7582
p.V811M
TCGA-DX-A8BM
SARC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.1389
p.T831I
TCGA-EE-A20C
SKCM
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.1111
p.T831I
DO222775
MELA
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.1111
p.T831I
DO47665
SKCM
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.1111
p.T810N
TCGA-VS-A9V1
CESC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.1111
p.T810N
DO51648
CESC
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.1111
p.P812S
DO234285
ESAD
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.1667
p.P820S
DO222843
MELA
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.6752
p.S817F
SIDM00252
Biliary Tract Carcinoma
GDSC
LTPQPT
DEG_SCF_FBW7_1
0.3056
p.S817F
TGBC1TKB
biliary_tract
COSMIC
LTPQPT
DEG_SCF_FBW7_1
0.3056
p.P825T
SIDM01596
Non-Small Cell Lung Carcinoma
GDSC
LTPQPT
DEG_SCF_FBW7_1
0.2778
p.W809S
ACH-002004
Skin Cancer
CCLE
LTPQPT
DEG_SCF_FBW7_1
0.0833
p.T819S
ACH-002024
Colon/Colorectal Cancer
CCLE
LTPQPT
DEG_SCF_FBW7_1
0.7116
Drug responses associated with CDHR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPQPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JP9
Cadherin-related family member 1
DEG_SCF_FBW7_1
818:823
LTPQPT
FBXW7
0.946
More...
Q96L96
Alpha-protein kinase 3
DEG_SCF_FBW7_1
672:677
LTPQPT
FBXW7
0.7071
More...