DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPQPT
Uniprot ID:
Q96L96
Source protein:
Alpha-protein kinase 3
Source gene:
ALPK3
Class:
DEG_SCF_FBW7_1
Location:
672:677
E3 ligase:
FBXW7
DEGRON score:
0.7071
ASA_SCORE:
100.25
COIL:
0.9622
CONS_SCORE:
0.4879
DSS_SCORE:
0.8589
HELIX:
0.0135
FCONS_SCORE:
0.9173
RIG_SCORE:
0.6047
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H670D
TCGA-43-5668
LUSC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.2778
p.H670D
DO26608
LUSC
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.2778
p.K683N
TCGA-85-8351
LUSC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.2778
p.K683N
DO45447
LUSC
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.2778
p.P687H
TCGA-AP-A051
UCEC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.0556
p.P687H
DO42673
UCEC
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.0556
p.A664T
TCGA-BS-A0UV
UCEC
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.1111
p.A664T
DO42793
UCEC
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.1111
p.T669I
TCGA-CD-A4MJ
STAD
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.25
p.T669I
DO47811
STAD
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.25
p.P687S
TCGA-D9-A6EC
SKCM
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.0556
p.P687S
DO50291
SKCM
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.0556
p.R682I
TCGA-FS-A1Z0
SKCM
TCGA
LTPQPT
DEG_SCF_FBW7_1
0.1944
p.R682I
DO37431
SKCM
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.1944
p.A664S
DO229019
LICA
ICGC
LTPQPT
DEG_SCF_FBW7_1
0.1111
p.G663D
SIDM00935
Other Solid Cancers
GDSC
LTPQPT
DEG_SCF_FBW7_1
0.0833
p.G663D
SIDM00414
Bladder Carcinoma
GDSC
LTPQPT
DEG_SCF_FBW7_1
0.0833
p.G663D
SIDM00032
Bladder Carcinoma
GDSC
LTPQPT
DEG_SCF_FBW7_1
0.0833
p.Q667K
ACH-001194
Kidney Cancer
CCLE
LTPQPT
DEG_SCF_FBW7_1
0.1944
Drug responses associated with ALPK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPQPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JP9
Cadherin-related family member 1
DEG_SCF_FBW7_1
818:823
LTPQPT
FBXW7
0.946
More...
Q96L96
Alpha-protein kinase 3
DEG_SCF_FBW7_1
672:677
LTPQPT
FBXW7
0.7071
More...