DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPTNT
Uniprot ID:
Q5T7N8
Source protein:
Protein FAM27D1
Source gene:
FAM27D1
Class:
DEG_SCF_FBW7_1
Location:
183:188
E3 ligase:
FBXW7
DEGRON score:
0.8532
ASA_SCORE:
71.9
COIL:
0.6802
CONS_SCORE:
0.0999
DSS_SCORE:
0.4033
HELIX:
0.1648
FCONS_SCORE:
1
RIG_SCORE:
0.7538
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R182L
DO228945
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.3056
p.R182L
DO229058
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.3056
p.S189F
DO228947
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.3056
p.P194S
DO229058
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1667
p.P196S
DO228950
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1111
p.P196S
DO228960
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1111
p.P196S
DO229056
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1111
p.P196S
DO229057
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1111
p.G173E
DO228941
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.0556
p.G173E
DO229006
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.0556
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Drug responses associated with FAM27D1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LTPTNT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T7N8
Protein FAM27D1
DEG_SCF_FBW7_1
183:188
LTPTNT
FBXW7
0.8532
More...
Q9Y5X1
Sorting nexin-9
DEG_SCF_FBW7_1
274:279
LTPTNT
FBXW7
0.7686
More...
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