DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LTPTNT
Uniprot ID:
Q9Y5X1
Source protein:
Sorting nexin-9
Source gene:
SNX9
Class:
DEG_SCF_FBW7_1
Location:
274:279
E3 ligase:
FBXW7
DEGRON score:
0.7686
ASA_SCORE:
77.25
COIL:
0.7245
CONS_SCORE:
0.501
DSS_SCORE:
0.2777
HELIX:
0.0177
FCONS_SCORE:
0.8493
RIG_SCORE:
0.7784
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R281Q
TCGA-B5-A11E
UCEC
TCGA
LTPTNT
DEG_SCF_FBW7_1
0.2778
p.R281Q
DO41644
UCEC
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.2778
p.R281Q
SIDM00193
Colorectal Carcinoma
GDSC
LTPTNT
DEG_SCF_FBW7_1
0.2778
p.R281Q
ACH-000991
Colon/Colorectal Cancer
CCLE
LTPTNT
DEG_SCF_FBW7_1
0.2778
p.R281Q
SNU-81
large_intestine
COSMIC
LTPTNT
DEG_SCF_FBW7_1
0.2778
p.N280S
TCGA-CQ-6221
HNSC
TCGA
LTPTNT
DEG_SCF_FBW7_1
0.3056
p.N280S
DO14622
HNSC
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.3056
p.L266I
TCGA-D3-A2JP
SKCM
TCGA
LTPTNT
DEG_SCF_FBW7_1
0.1111
p.L266I
DO47407
SKCM
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1111
p.R286M
TCGA-DU-6392
LGG
TCGA
LTPTNT
DEG_SCF_FBW7_1
0.1389
p.R286M
DO22237
LGG
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1389
p.R281L
TCGA-KQ-A41N
BLCA
TCGA
LTPTNT
DEG_SCF_FBW7_1
0.2778
p.R281L
DO223588
BLCA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.2778
p.H285R
DO222849
COCA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1667
p.S268I
DO229006
LICA
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1667
p.R286W
DO231078
LUSC
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.1389
p.E271K
DO228338
MALY
ICGC
LTPTNT
DEG_SCF_FBW7_1
0.25
p.E271K
SIDM00217
Colorectal Carcinoma
GDSC
LTPTNT
DEG_SCF_FBW7_1
0.25
p.E271K
ACH-000999
Colon/Colorectal Cancer
CCLE
LTPTNT
DEG_SCF_FBW7_1
0.25
p.E271K
SNU-1040
large_intestine
COSMIC
LTPTNT
DEG_SCF_FBW7_1
0.25
Drug responses associated with SNX9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPTNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5X1
Sorting nexin-9
DEG_SCF_FBW7_1
274:279
LTPTNT
FBXW7
0.7686
More...
Q5T7N8
Protein FAM27D1
DEG_SCF_FBW7_1
183:188
LTPTNT
FBXW7
0.8532
More...