DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVPFTE
Uniprot ID:
P31629
Source protein:
Transcription factor HIVEP2
Source gene:
HIVEP2
Class:
LIG_APCC_ABBA_1
Location:
247:252
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9358
ASA_SCORE:
72.85
COIL:
0.723
CONS_SCORE:
0.3229
DSS_SCORE:
0.1705
HELIX:
0.075
FCONS_SCORE:
0.4863
RIG_SCORE:
0.7931
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D259Y
TCGA-B0-4698
KIRC
TCGA
LVPFTE
LIG_APCC_ABBA_1
0.1389
p.D259Y
DO20368
KIRC
ICGC
LVPFTE
LIG_APCC_ABBA_1
0.1389
p.E261D
DO233918
GACA
ICGC
LVPFTE
LIG_APCC_ABBA_1
0.0833
p.A240D
DO229045
LICA
ICGC
LVPFTE
LIG_APCC_ABBA_1
0.1389
p.D259G
SIDM00223
Small Cell Lung Carcinoma
GDSC
LVPFTE
LIG_APCC_ABBA_1
0.1389
Drug responses associated with HIVEP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVPFTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P31629
Transcription factor HIVEP2
LIG_APCC_ABBA_1
247:252
LVPFTE
APC,CDC20,FZR1
0.9358
More...
Q6Y7W6
GRB10-interacting GYF protein 2
LIG_APCC_ABBA_1
81:86
LVPFTE
APC,CDC20,FZR1
0.8533
More...