DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVPFTE
Uniprot ID:
Q6Y7W6
Source protein:
GRB10-interacting GYF protein 2
Source gene:
GIGYF2
Class:
LIG_APCC_ABBA_1
Location:
81:86
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8533
ASA_SCORE:
61.5167
COIL:
0.7418
CONS_SCORE:
0.5633
DSS_SCORE:
0.3993
HELIX:
0.2197
FCONS_SCORE:
1.1426
RIG_SCORE:
0.8119
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R90I
TCGA-BK-A6W3
UCEC
TCGA
LVPFTE
LIG_APCC_ABBA_1
0.2222
p.R90I
DO8730
COAD
ICGC
LVPFTE
LIG_APCC_ABBA_1
0.2222
p.R90I
DO50076
UCEC
ICGC
LVPFTE
LIG_APCC_ABBA_1
0.2222
p.P78Q
TCGA-DI-A1BU
UCEC
TCGA
LVPFTE
LIG_APCC_ABBA_1
0.25
p.P78Q
DO42023
UCEC
ICGC
LVPFTE
LIG_APCC_ABBA_1
0.25
p.S93F
TCGA-EE-A17X
SKCM
TCGA
LVPFTE
LIG_APCC_ABBA_1
0.1389
p.S93F
DO37931
SKCM
ICGC
LVPFTE
LIG_APCC_ABBA_1
0.1389
p.A80T
DO222404
BTCA
ICGC
LVPFTE
LIG_APCC_ABBA_1
0.3056
p.L76P
ACH-002026
Endometrial/Uterine Cancer
CCLE
LVPFTE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with GIGYF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVPFTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P31629
Transcription factor HIVEP2
LIG_APCC_ABBA_1
247:252
LVPFTE
APC,CDC20,FZR1
0.9358
More...
Q6Y7W6
GRB10-interacting GYF protein 2
LIG_APCC_ABBA_1
81:86
LVPFTE
APC,CDC20,FZR1
0.8533
More...