DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MKENI
Uniprot ID:
Q9UPW5
Source protein:
Cytosolic carboxypeptidase 1
Source gene:
AGTPBP1
Class:
DEG_APCC_KENBOX_2
Location:
477:481
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.605
ASA_SCORE:
99.5
COIL:
0.49
CONS_SCORE:
0.2609
DSS_SCORE:
0.5304
HELIX:
0.0342
FCONS_SCORE:
1.0108
RIG_SCORE:
0.754
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T479S
TCGA-12-1088
GBM
TCGA
MKENI
DEG_APCC_KENBOX_2
0.7116
p.T479S
TCGA-23-1032
OV
TCGA
MKENI
DEG_APCC_KENBOX_2
0.7116
p.D489Y
TCGA-AP-A1DV
UCEC
TCGA
MKENI
DEG_APCC_KENBOX_2
0.1111
p.P473S
TCGA-AX-A05Z
UCEC
TCGA
MKENI
DEG_APCC_KENBOX_2
0.2222
p.R467I
TCGA-B5-A1MR
UCEC
TCGA
MKENI
DEG_APCC_KENBOX_2
0.0556
p.R478I
TCGA-BS-A0UF
UCEC
TCGA
MKENI
DEG_APCC_KENBOX_2
0.8102
p.R478I
TCGA-EO-A3B0
UCEC
TCGA
MKENI
DEG_APCC_KENBOX_2
0.8102
p.V483A
TCGA-FI-A2D5
UCEC
TCGA
MKENI
DEG_APCC_KENBOX_2
0.2778
p.M489I
DO2401
BRCA
ICGC
MKENI
DEG_APCC_KENBOX_2
0.1111
p.M489L
DO231590
LINC
ICGC
MKENI
DEG_APCC_KENBOX_2
0.1111
p.V475A
DO48654
SKCM
ICGC
MKENI
DEG_APCC_KENBOX_2
0.2778
p.G482D
DO38727
STAD
ICGC
MKENI
DEG_APCC_KENBOX_2
0.3056
p.I481V
DO43755
UCEC
ICGC
MKENI
DEG_APCC_KENBOX_2
0.5965
p.Y488C
SIDM00198
Ewing's Sarcoma
GDSC
MKENI
DEG_APCC_KENBOX_2
0.1389
p.Y488C
EW-16
bone
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.1389
p.I468T
SIDM00382
Glioblastoma
GDSC
MKENI
DEG_APCC_KENBOX_2
0.0833
p.I468T
SF126
central_nervous_system
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.0833
p.H476Y
SIDM00214
Colorectal Carcinoma
GDSC
MKENI
DEG_APCC_KENBOX_2
0.3056
p.H476Y
SNU-407
large_intestine
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.3056
p.Q471R
ACH-000335
Lung Cancer
CCLE
MKENI
DEG_APCC_KENBOX_2
0.1667
p.Q471R
MSTO-211H
pleura
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.1667
p.H484Y
ACH-000493
Liver Cancer
CCLE
MKENI
DEG_APCC_KENBOX_2
0.3611
p.H484Y
SNU-423
liver
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.3611
p.A473V
SNU-1040
large_intestine
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.2222
p.D470G
NCI-H1417
lung
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.1389
p.N483D
CESS
haematopoietic_and_lymphoid_tissue
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.2778
p.N471D
CESS
haematopoietic_and_lymphoid_tissue
COSMIC
MKENI
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with AGTPBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MKENI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P2E9
Enhancer of mRNA-decapping protein 4
DEG_APCC_KENBOX_2
1081:1085
MKENI
APC,CDC20,FZR1
0.8442
More...
Q9UPW5
Cytosolic carboxypeptidase 1
DEG_APCC_KENBOX_2
477:481
MKENI
APC,CDC20,FZR1
0.605
More...