DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MKENV
Uniprot ID:
A4FU69
Source protein:
EF-hand calcium-binding domain-containing protein 5
Source gene:
EFCAB5
Class:
DEG_APCC_KENBOX_2
Location:
260:264
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.552
ASA_SCORE:
99.22
COIL:
0.4396
CONS_SCORE:
0.4315
DSS_SCORE:
0.4744
HELIX:
0.5348
FCONS_SCORE:
1.1085
RIG_SCORE:
0.7953
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P250T
TCGA-A5-A0G2
UCEC
TCGA
MKENV
DEG_APCC_KENBOX_2
0.0556
p.P250S
TCGA-AP-A1E0
UCEC
TCGA
MKENV
DEG_APCC_KENBOX_2
0.0556
p.P250H
TCGA-EB-A299
SKCM
TCGA
MKENV
DEG_APCC_KENBOX_2
0.0556
p.P250H
DO37794
SKCM
ICGC
MKENV
DEG_APCC_KENBOX_2
0.0556
p.E259D
DO8264
COAD
ICGC
MKENV
DEG_APCC_KENBOX_2
0.3056
p.K250N
DO228952
LICA
ICGC
MKENV
DEG_APCC_KENBOX_2
0.0556
p.Q266H
DO229015
LICA
ICGC
MKENV
DEG_APCC_KENBOX_2
0.2778
p.V256F
DO229022
LICA
ICGC
MKENV
DEG_APCC_KENBOX_2
0.2222
p.C254F
DO232761
PBCA
ICGC
MKENV
DEG_APCC_KENBOX_2
0.1667
p.L268I
DO229227
THCA
ICGC
MKENV
DEG_APCC_KENBOX_2
0.2222
p.C272Y
DO41584
UCEC
ICGC
MKENV
DEG_APCC_KENBOX_2
0.1111
p.I274V
SIDM00130
Pancreatic Carcinoma
GDSC
MKENV
DEG_APCC_KENBOX_2
0.0556
p.I274V
ACH-000138
Pancreatic Cancer
CCLE
MKENV
DEG_APCC_KENBOX_2
0.0556
p.I274V
CFPAC-1
pancreas
COSMIC
MKENV
DEG_APCC_KENBOX_2
0.0556
p.V252A
SNU-C5
large_intestine
COSMIC
MKENV
DEG_APCC_KENBOX_2
0.1111
p.P264S
C32
skin
COSMIC
MKENV
DEG_APCC_KENBOX_2
0.6752
Drug responses associated with EFCAB5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P83111
Serine beta-lactamase-like protein LACTB, mitochondrial
DEG_APCC_KENBOX_2
242:246
MKENV
APC,CDC20,FZR1
0.7634
More...
A4FU69
EF-hand calcium-binding domain-containing protein 5
DEG_APCC_KENBOX_2
260:264
MKENV
APC,CDC20,FZR1
0.552
More...