DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MLTPPQE
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_SCF_FBW7_2
Location:
723:729
E3 ligase:
FBXW7
DEGRON score:
0.9812
ASA_SCORE:
107.6286
COIL:
0.9093
CONS_SCORE:
0.3384
DSS_SCORE:
0.6208
HELIX:
0.0393
FCONS_SCORE:
0.8484
RIG_SCORE:
0.7045
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S736I
TCGA-44-7662
LUAD
TCGA
MLTPPQE
DEG_SCF_FBW7_2
0.1389
p.S736I
DO23597
LUAD
ICGC
MLTPPQE
DEG_SCF_FBW7_2
0.1389
p.A721V
TCGA-FR-A8YC
SKCM
TCGA
MLTPPQE
DEG_SCF_FBW7_2
0.2778
p.A721V
DO50301
SKCM
ICGC
MLTPPQE
DEG_SCF_FBW7_2
0.2778
p.P727S
TCGA-FV-A2QR
LIHC
TCGA
MLTPPQE
DEG_SCF_FBW7_2
0.5641
p.P727S
DO22837
LIHC
ICGC
MLTPPQE
DEG_SCF_FBW7_2
0.5641
p.P727L
DO50951
LICA
ICGC
MLTPPQE
DEG_SCF_FBW7_2
0.6471
p.G731D
SIDM01109
Other Sarcomas
GDSC
MLTPPQE
DEG_SCF_FBW7_2
0.2778
p.G731D
ACH-000145
Sarcoma
CCLE
MLTPPQE
DEG_SCF_FBW7_2
0.2778
p.G731D
SK-LMS-1
soft_tissue
COSMIC
MLTPPQE
DEG_SCF_FBW7_2
0.2778
p.L730I
SIDM01007
T-Lymphoblastic Leukemia
GDSC
MLTPPQE
DEG_SCF_FBW7_2
0.3056
p.L730I
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
MLTPPQE
DEG_SCF_FBW7_2
0.3056
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MLTPPQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_2
723:729
MLTPPQE
FBXW7
0.9812
More...
Q99466
Neurogenic locus notch homolog protein 4
DEG_SCF_FBW7_2
1566:1572
MLTPPQE
FBXW7
0.7036
More...