DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENY
Uniprot ID:
Q8NE31
Source protein:
Protein FAM13C
Source gene:
FAM13C
Class:
DEG_APCC_KENBOX_2
Location:
44:48
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9877
ASA_SCORE:
89.64
COIL:
0.7616
CONS_SCORE:
0.4677
DSS_SCORE:
0.5929
HELIX:
0.1554
FCONS_SCORE:
1.4059
RIG_SCORE:
0.643
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D50N
TCGA-AP-A1DV
UCEC
TCGA
NKENY
DEG_APCC_KENBOX_2
0.2778
p.D50N
DO43186
UCEC
ICGC
NKENY
DEG_APCC_KENBOX_2
0.2778
p.D41Y
TCGA-EO-A22X
UCEC
TCGA
NKENY
DEG_APCC_KENBOX_2
0.25
p.D41Y
DO43907
UCEC
ICGC
NKENY
DEG_APCC_KENBOX_2
0.25
p.V55I
TCGA-GN-A26C
SKCM
TCGA
NKENY
DEG_APCC_KENBOX_2
0.1389
p.V55I
DO37782
SKCM
ICGC
NKENY
DEG_APCC_KENBOX_2
0.1389
p.L54M
TCGA-IS-A3K8
SARC
TCGA
NKENY
DEG_APCC_KENBOX_2
0.1667
p.L54M
DO220170
SARC
ICGC
NKENY
DEG_APCC_KENBOX_2
0.1667
p.A51T
DO52478
COCA
ICGC
NKENY
DEG_APCC_KENBOX_2
0.25
p.P49S
DO228508
LICA
ICGC
NKENY
DEG_APCC_KENBOX_2
0.3056
p.D35Y
SIDM01310
Esophageal Carcinoma
GDSC
NKENY
DEG_APCC_KENBOX_2
0.0833
p.D35Y
SIDM01311
Esophageal Carcinoma
GDSC
NKENY
DEG_APCC_KENBOX_2
0.0833
p.H58Q
SIDM01183
Other Solid Cancers
GDSC
NKENY
DEG_APCC_KENBOX_2
0.0556
p.H58Q
ACH-001417
Lung Cancer
CCLE
NKENY
DEG_APCC_KENBOX_2
0.0556
p.H58Q
UMC-11
lung
COSMIC
NKENY
DEG_APCC_KENBOX_2
0.0556
p.L39V
ACH-000868
Lung Cancer
CCLE
NKENY
DEG_APCC_KENBOX_2
0.1944
p.N47Y
ACH-001642
Lymphoma
CCLE
NKENY
DEG_APCC_KENBOX_2
0.7059
p.R40T
ECC10
stomach
COSMIC
NKENY
DEG_APCC_KENBOX_2
0.2222
Drug responses associated with FAM13C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43683
Mitotic checkpoint serine/threonine-protein kinase BUB1
DEG_APCC_KENBOX_2
534:538
NKENY
APC,CDC20,FZR1
0.9657
More...
Q8NE31
Protein FAM13C
DEG_APCC_KENBOX_2
44:48
NKENY
APC,CDC20,FZR1
0.9877
More...
Q9Y639
Neuroplastin
DEG_APCC_KENBOX_2
293:297
NKENY
APC,CDC20,FZR1
0.6319
More...