DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENY
Uniprot ID:
Q9Y639
Source protein:
Neuroplastin
Source gene:
NPTN
Class:
DEG_APCC_KENBOX_2
Location:
293:297
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6319
ASA_SCORE:
97.3
COIL:
0.568
CONS_SCORE:
0.5266
DSS_SCORE:
0.1096
HELIX:
0.0158
FCONS_SCORE:
0.8691
RIG_SCORE:
0.8672
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R288H
TCGA-A5-A0G2
UCEC
TCGA
NKENY
DEG_APCC_KENBOX_2
0.1944
p.R288H
DO233102
GACA
ICGC
NKENY
DEG_APCC_KENBOX_2
0.1944
p.R288H
DO41235
UCEC
ICGC
NKENY
DEG_APCC_KENBOX_2
0.1944
p.T298A
TCGA-DF-A2KZ
UCEC
TCGA
NKENY
DEG_APCC_KENBOX_2
0.3056
p.T298A
DO52409
UCEC
ICGC
NKENY
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with NPTN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43683
Mitotic checkpoint serine/threonine-protein kinase BUB1
DEG_APCC_KENBOX_2
534:538
NKENY
APC,CDC20,FZR1
0.9657
More...
Q8NE31
Protein FAM13C
DEG_APCC_KENBOX_2
44:48
NKENY
APC,CDC20,FZR1
0.9877
More...
Q9Y639
Neuroplastin
DEG_APCC_KENBOX_2
293:297
NKENY
APC,CDC20,FZR1
0.6319
More...