DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PARTPPAS
Uniprot ID:
Q8N3V7
Source protein:
Synaptopodin
Source gene:
SYNPO
Class:
DEG_SCF_FBW7_1
Location:
780:787
E3 ligase:
FBXW7
DEGRON score:
0.9961
ASA_SCORE:
93.75
COIL:
0.9478
CONS_SCORE:
0.8918
DSS_SCORE:
0.4807
HELIX:
0.0345
FCONS_SCORE:
1.2052
RIG_SCORE:
0.6148
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P770T
TCGA-A6-6781
COAD
TCGA
PARTPPAS
DEG_SCF_FBW7_1
0.0556
p.P770T
DO8447
COAD
ICGC
PARTPPAS
DEG_SCF_FBW7_1
0.0556
p.R778Q
TCGA-BS-A0UV
UCEC
TCGA
PARTPPAS
DEG_SCF_FBW7_1
0.2778
p.R778Q
DO42793
UCEC
ICGC
PARTPPAS
DEG_SCF_FBW7_1
0.2778
p.A781S
TCGA-E9-A295
BRCA
TCGA
PARTPPAS
DEG_SCF_FBW7_1
0.6477
p.A781S
DO3703
BRCA
ICGC
PARTPPAS
DEG_SCF_FBW7_1
0.6477
p.A781S
DO232761
PBCA
ICGC
PARTPPAS
DEG_SCF_FBW7_1
0.6477
p.T783P
TCGA-EA-A3HT
CESC
TCGA
PARTPPAS
DEG_SCF_FBW7_1
0.8142
p.R782Q
TCGA-HT-8564
LGG
TCGA
PARTPPAS
DEG_SCF_FBW7_1
0.6218
p.R782Q
DO44623
LGG
ICGC
PARTPPAS
DEG_SCF_FBW7_1
0.6218
p.P780S
DO229013
COCA
ICGC
PARTPPAS
DEG_SCF_FBW7_1
0.6752
p.A777T
DO228338
MALY
ICGC
PARTPPAS
DEG_SCF_FBW7_1
0.6944
p.P794L
DO51958
PRAD
ICGC
PARTPPAS
DEG_SCF_FBW7_1
0.1389
p.R782W
SIDM01638
Non-Cancerous
GDSC
PARTPPAS
DEG_SCF_FBW7_1
0.7523
p.V775M
SIDM01569
Hepatocellular Carcinoma
GDSC
PARTPPAS
DEG_SCF_FBW7_1
0.1944
p.P792L
ACH-001861
Gallbladder Cancer
CCLE
PARTPPAS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with SYNPO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PARTPPAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3V7
Synaptopodin
DEG_SCF_FBW7_1
780:787
PARTPPAS
FBXW7
0.9961
More...
Q9HCH3
Copine-5
DEG_SCF_FBW7_1
580:587
PARTPPAS
FBXW7
0.9969
More...