DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKEND
Uniprot ID:
Q9NWQ8
Source protein:
Phosphoprotein associated with glycosphingolipid-enriched microdomains 1
Source gene:
PAG1
Class:
DEG_APCC_KENBOX_2
Location:
412:416
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9912
ASA_SCORE:
83.8
COIL:
0.7766
CONS_SCORE:
0.6954
DSS_SCORE:
0.5831
HELIX:
0.179
FCONS_SCORE:
1.2315
RIG_SCORE:
0.7135
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T404A
TCGA-AJ-A23O
UCEC
TCGA
PKEND
DEG_APCC_KENBOX_2
0.5556
p.T404A
DO43290
UCEC
ICGC
PKEND
DEG_APCC_KENBOX_2
0.5556
p.D422E
TCGA-B5-A5OE
UCEC
TCGA
PKEND
DEG_APCC_KENBOX_2
0.1667
p.D422E
DO52408
UCEC
ICGC
PKEND
DEG_APCC_KENBOX_2
0.1667
p.D416N
TCGA-EC-A24G
UCEC
TCGA
PKEND
DEG_APCC_KENBOX_2
0.5821
p.D416N
DO40996
UCEC
ICGC
PKEND
DEG_APCC_KENBOX_2
0.5821
p.S419R
TCGA-VD-A8KA
UVM
TCGA
PKEND
DEG_APCC_KENBOX_2
0.6944
p.D416A
TCGA-VD-A8KA
UVM
TCGA
PKEND
DEG_APCC_KENBOX_2
0.6682
p.K413E
SIDM00663
Melanoma
GDSC
PKEND
DEG_APCC_KENBOX_2
0.7022
p.K413E
ACH-000814
Skin Cancer
CCLE
PKEND
DEG_APCC_KENBOX_2
0.7022
p.K413E
Hs939-T
skin
COSMIC
PKEND
DEG_APCC_KENBOX_2
0.7022
p.L423F
SIDM01055
Glioblastoma
GDSC
PKEND
DEG_APCC_KENBOX_2
0.1389
p.L423F
ACH-000098
Brain Cancer
CCLE
PKEND
DEG_APCC_KENBOX_2
0.1389
p.L423F
GAMG
central_nervous_system
COSMIC
PKEND
DEG_APCC_KENBOX_2
0.1389
p.V411I
SIDM00375
Head and Neck Carcinoma
GDSC
PKEND
DEG_APCC_KENBOX_2
0.3056
p.V411I
SIDM00163
Biliary Tract Carcinoma
GDSC
PKEND
DEG_APCC_KENBOX_2
0.3056
p.V411I
SIDM01640
Acute Myeloid Leukemia
GDSC
PKEND
DEG_APCC_KENBOX_2
0.3056
p.V411I
SKN-3
upper_aerodigestive_tract
COSMIC
PKEND
DEG_APCC_KENBOX_2
0.3056
p.G409S
ACH-001843
Bile Duct Cancer
CCLE
PKEND
DEG_APCC_KENBOX_2
0.25
Drug responses associated with PAG1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKEND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86T82
Ubiquitin carboxyl-terminal hydrolase 37
DEG_APCC_KENBOX_2
220:224
PKEND
APC,CDC20,FZR1
0.9138
More...
Q9NWQ8
Phosphoprotein associated with glycosphingolipid-enriched microdomains 1
DEG_APCC_KENBOX_2
412:416
PKEND
APC,CDC20,FZR1
0.9912
More...