DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKENE
Uniprot ID:
Q9H7U1
Source protein:
Serine-rich coiled-coil domain-containing protein 2
Source gene:
CCSER2
Class:
DEG_APCC_KENBOX_2
Location:
453:457
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7463
ASA_SCORE:
89.54
COIL:
0.6108
CONS_SCORE:
0.5974
DSS_SCORE:
0.6902
HELIX:
0.3236
FCONS_SCORE:
1.1234
RIG_SCORE:
0.6659
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P445S
TCGA-BR-8360
STAD
TCGA
PKENE
DEG_APCC_KENBOX_2
0.1111
p.P445S
DO47745
STAD
ICGC
PKENE
DEG_APCC_KENBOX_2
0.1111
p.E455D
TCGA-EE-A2M5
SKCM
TCGA
PKENE
DEG_APCC_KENBOX_2
0.6758
p.E455D
DO222423
MELA
ICGC
PKENE
DEG_APCC_KENBOX_2
0.6758
p.E455D
DO37425
SKCM
ICGC
PKENE
DEG_APCC_KENBOX_2
0.6758
p.A459G
TCGA-HC-7232
PRAD
TCGA
PKENE
DEG_APCC_KENBOX_2
0.2778
p.A459G
DO49799
PRAD
ICGC
PKENE
DEG_APCC_KENBOX_2
0.2778
p.P453L
TCGA-T3-A92N
HNSC
TCGA
PKENE
DEG_APCC_KENBOX_2
0.6471
p.P453L
DO219073
HNSC
ICGC
PKENE
DEG_APCC_KENBOX_2
0.6471
p.S461N
SIDM00581
Glioblastoma
GDSC
PKENE
DEG_APCC_KENBOX_2
0.6667
p.S461N
ACH-000738
Brain Cancer
CCLE
PKENE
DEG_APCC_KENBOX_2
0.6667
p.S461N
GB-1
central_nervous_system
COSMIC
PKENE
DEG_APCC_KENBOX_2
0.6667
Drug responses associated with CCSER2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2M3C7
A-kinase anchor protein SPHKAP
DEG_APCC_KENBOX_2
123:127
PKENE
APC,CDC20,FZR1
0.774
More...
Q9H7U1
Serine-rich coiled-coil domain-containing protein 2
DEG_APCC_KENBOX_2
453:457
PKENE
APC,CDC20,FZR1
0.7463
More...