DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTPPPS
Uniprot ID:
O43294
Source protein:
Transforming growth factor beta-1-induced transcript 1 protein
Source gene:
TGFB1I1
Class:
DEG_SCF_FBW7_1
Location:
31:37
E3 ligase:
FBXW7
DEGRON score:
0.9826
ASA_SCORE:
91.4857
COIL:
0.9771
CONS_SCORE:
0.4051
DSS_SCORE:
0.8713
HELIX:
0.0084
FCONS_SCORE:
1.0182
RIG_SCORE:
0.5332
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E30K
TCGA-86-A4JF
LUAD
TCGA
PLTPPPS
DEG_SCF_FBW7_1
0.3056
p.R27H
TCGA-A5-A0G2
UCEC
TCGA
PLTPPPS
DEG_SCF_FBW7_1
0.2222
p.R27C
TCGA-B5-A11G
UCEC
TCGA
PLTPPPS
DEG_SCF_FBW7_1
0.2222
p.S21P
TCGA-B5-A1MR
UCEC
TCGA
PLTPPPS
DEG_SCF_FBW7_1
0.0556
p.E30G
TCGA-B5-A3FA
UCEC
TCGA
PLTPPPS
DEG_SCF_FBW7_1
0.3056
p.P34S
TCGA-EE-A3AG
SKCM
TCGA
PLTPPPS
DEG_SCF_FBW7_1
0.6752
p.P35L
TCGA-QB-AA9O
SKCM
TCGA
PLTPPPS
DEG_SCF_FBW7_1
0.6471
p.T45M
DO9956
COAD
ICGC
PLTPPPS
DEG_SCF_FBW7_1
0.1111
p.T45M
SNU-C2B
large_intestine
COSMIC
PLTPPPS
DEG_SCF_FBW7_1
0.1111
p.S36A
DO233869
GACA
ICGC
PLTPPPS
DEG_SCF_FBW7_1
0.7588
p.T45K
DO24527
LUAD
ICGC
PLTPPPS
DEG_SCF_FBW7_1
0.1111
p.P25S
DO228429
MALY
ICGC
PLTPPPS
DEG_SCF_FBW7_1
0.2778
p.H23P
DO229499
SKCA
ICGC
PLTPPPS
DEG_SCF_FBW7_1
0.1111
p.A35V
DO41235
UCEC
ICGC
PLTPPPS
DEG_SCF_FBW7_1
0.6936
p.T33P
ACH-000067
Brain Cancer
CCLE
PLTPPPS
DEG_SCF_FBW7_1
0.8142
Drug responses associated with TGFB1I1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43294
Transforming growth factor beta-1-induced transcript 1 protein
DEG_SCF_FBW7_1
31:37
PLTPPPS
FBXW7
0.9826
More...
Q5THJ4
Intermembrane lipid transfer protein VPS13D
DEG_SCF_FBW7_1
1759:1765
PLTPPPS
FBXW7
0.8914
More...