DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PMTSS
Uniprot ID:
A6H8Y1
Source protein:
Transcription factor TFIIIB component B'' homolog
Source gene:
BDP1
Class:
DEG_SPOP_SBC_1
Location:
198:202
E3 ligase:
SPOP
DEGRON score:
0.9993
ASA_SCORE:
76.96
COIL:
0.8326
CONS_SCORE:
0.5884
DSS_SCORE:
0.6236
HELIX:
0.1272
FCONS_SCORE:
1.0989
RIG_SCORE:
0.6384
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E206A
TCGA-2W-A8YY
CESC
TCGA
PMTSS
DEG_SPOP_SBC_1
0.2222
p.E206A
DO223732
CESC
ICGC
PMTSS
DEG_SPOP_SBC_1
0.2222
p.M199R
TCGA-85-8071
LUSC
TCGA
PMTSS
DEG_SPOP_SBC_1
0.7521
p.M199R
DO26755
LUSC
ICGC
PMTSS
DEG_SPOP_SBC_1
0.7521
p.E198Q
DO224650
BRCA
ICGC
PMTSS
DEG_SPOP_SBC_1
0.6744
p.I195V
DO230323
COCA
ICGC
PMTSS
DEG_SPOP_SBC_1
0.25
p.P194S
DO11854
GBM
ICGC
PMTSS
DEG_SPOP_SBC_1
0.2222
p.R203S
DO24646
LUAD
ICGC
PMTSS
DEG_SPOP_SBC_1
0.3056
p.E198K
DO232761
PBCA
ICGC
PMTSS
DEG_SPOP_SBC_1
0.7022
p.A188T
DO229275
THCA
ICGC
PMTSS
DEG_SPOP_SBC_1
0.0556
p.L197F
DO229232
THCA
ICGC
PMTSS
DEG_SPOP_SBC_1
0.3056
p.M199T
SIDM01608
Endometrial Carcinoma
GDSC
PMTSS
DEG_SPOP_SBC_1
0.6312
p.M199T
ACH-000990
Endometrial/Uterine Cancer
CCLE
PMTSS
DEG_SPOP_SBC_1
0.6312
Drug responses associated with BDP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PMTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6H8Y1
Transcription factor TFIIIB component B'' homolog
DEG_SPOP_SBC_1
198:202
PMTSS
SPOP
0.9993
More...
O60732
Melanoma-associated antigen C1
DEG_SPOP_SBC_1
411:415
PMTSS
SPOP
0.9969
More...