DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPGTPPAS
Uniprot ID:
O60343
Source protein:
TBC1 domain family member 4
Source gene:
TBC1D4
Class:
DEG_SCF_FBW7_1
Location:
610:617
E3 ligase:
FBXW7
DEGRON score:
0.9979
ASA_SCORE:
80.3125
COIL:
0.9683
CONS_SCORE:
0.3508
DSS_SCORE:
0.82
HELIX:
0.0109
FCONS_SCORE:
1.1314
RIG_SCORE:
0.4484
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S609F
TCGA-AC-A23C
BRCA
TCGA
PPGTPPAS
DEG_SCF_FBW7_1
0.75
p.S609F
DO3626
BRCA
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.75
p.A622V
TCGA-AX-A2HD
UCEC
TCGA
PPGTPPAS
DEG_SCF_FBW7_1
0.1944
p.A622V
DO42608
UCEC
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.1944
p.P614L
TCGA-B5-A3FA
UCEC
TCGA
PPGTPPAS
DEG_SCF_FBW7_1
0.7582
p.P614L
DO52402
UCEC
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.7582
p.G607W
TCGA-BF-A1PZ
SKCM
TCGA
PPGTPPAS
DEG_SCF_FBW7_1
0.25
p.G607W
DO50279
SKCM
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.25
p.P619L
DO234285
ESAD
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.2778
p.P606T
DO229019
LICA
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.2222
p.W623S
DO46493
OV
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.1667
p.T625M
ACH-001688
Kidney Cancer
CCLE
PPGTPPAS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with TBC1D4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPGTPPAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60343
TBC1 domain family member 4
DEG_SCF_FBW7_1
610:617
PPGTPPAS
FBXW7
0.9979
More...
Q8N398
von Willebrand factor A domain-containing protein 5B2
DEG_SCF_FBW7_1
964:971
PPGTPPAS
FBXW7
0.9679
More...