DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPGTPPAS
Uniprot ID:
Q8N398
Source protein:
von Willebrand factor A domain-containing protein 5B2
Source gene:
VWA5B2
Class:
DEG_SCF_FBW7_1
Location:
964:971
E3 ligase:
FBXW7
DEGRON score:
0.9679
ASA_SCORE:
64.8
COIL:
0.9035
CONS_SCORE:
0.4338
DSS_SCORE:
0.6902
HELIX:
0.0651
FCONS_SCORE:
1.0808
RIG_SCORE:
0.5197
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H974N
TCGA-AX-A3G8
UCEC
TCGA
PPGTPPAS
DEG_SCF_FBW7_1
0.25
p.H974N
DO41014
UCEC
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.25
p.P981H
TCGA-D1-A176
UCEC
TCGA
PPGTPPAS
DEG_SCF_FBW7_1
0.0556
p.P981H
DO43947
UCEC
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.0556
p.A978D
TCGA-DF-A2KU
UCEC
TCGA
PPGTPPAS
DEG_SCF_FBW7_1
0.1389
p.A978D
DO223286
UCEC
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.1389
p.P969L
TCGA-LN-A49M
ESCA
TCGA
PPGTPPAS
DEG_SCF_FBW7_1
0.6471
p.A977S
DO229026
LICA
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.1667
p.P969A
DO50726
ORCA
ICGC
PPGTPPAS
DEG_SCF_FBW7_1
0.6392
p.A962T
SIDM01016
T-Lymphoblastic Leukemia
GDSC
PPGTPPAS
DEG_SCF_FBW7_1
0.2778
p.A962T
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PPGTPPAS
DEG_SCF_FBW7_1
0.2778
p.G966E
SIDM00640
Mesothelioma
GDSC
PPGTPPAS
DEG_SCF_FBW7_1
0.6087
p.G966E
SIDM00079
Ovarian Carcinoma
GDSC
PPGTPPAS
DEG_SCF_FBW7_1
0.6087
p.K975R
RKO
large_intestine
COSMIC
PPGTPPAS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with VWA5B2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPGTPPAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60343
TBC1 domain family member 4
DEG_SCF_FBW7_1
610:617
PPGTPPAS
FBXW7
0.9979
More...
Q8N398
von Willebrand factor A domain-containing protein 5B2
DEG_SCF_FBW7_1
964:971
PPGTPPAS
FBXW7
0.9679
More...