DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPQAIVKPQ
Uniprot ID:
P78364
Source protein:
Polyhomeotic-like protein 1
Source gene:
PHC1
Class:
DEG_SIAH_1
Location:
724:732
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.7654
ASA_SCORE:
88.3444
COIL:
0.8654
CONS_SCORE:
0.6694
DSS_SCORE:
0.439
HELIX:
0.0417
FCONS_SCORE:
1.0873
RIG_SCORE:
0.7592
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M719L
TCGA-23-1117
OV
TCGA
PPQAIVKPQ
DEG_SIAH_1
0.1944
p.V729M
TCGA-AX-A1CE
UCEC
TCGA
PPQAIVKPQ
DEG_SIAH_1
0.7208
p.V729M
SIDM00364
B-Lymphoblastic Leukemia
GDSC
PPQAIVKPQ
DEG_SIAH_1
0.7208
p.V729M
ACH-002059
Leukemia
CCLE
PPQAIVKPQ
DEG_SIAH_1
0.7208
p.V729M
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
PPQAIVKPQ
DEG_SIAH_1
0.7208
p.K730T
TCGA-B5-A1MR
UCEC
TCGA
PPQAIVKPQ
DEG_SIAH_1
0.6195
p.H736R
TCGA-DU-6392
LGG
TCGA
PPQAIVKPQ
DEG_SIAH_1
0.2222
p.G720A
TCGA-V5-A7RB
ESCA
TCGA
PPQAIVKPQ
DEG_SIAH_1
0.2222
p.M719I
TCGA-ZG-A9LN
PRAD
TCGA
PPQAIVKPQ
DEG_SIAH_1
0.1944
p.I737L
SIDM02072
Colorectal Carcinoma
GDSC
PPQAIVKPQ
DEG_SIAH_1
0.1944
p.G727W
C-33-A
cervix
COSMIC
PPQAIVKPQ
DEG_SIAH_1
0.7825
p.P736R
LS-123
large_intestine
COSMIC
PPQAIVKPQ
DEG_SIAH_1
0.2222
p.E717D
LNCaP-Clone-FGC
prostate
COSMIC
PPQAIVKPQ
DEG_SIAH_1
0.1389
Drug responses associated with PHC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPQAIVKPQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78364
Polyhomeotic-like protein 1
DEG_SIAH_1
724:732
PPQAIVKPQ
SIAH1,SIAH2,SIAH3
0.7654
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SIAH_1
692:700
PPQAIVKPQ
SIAH1,SIAH2,SIAH3
0.757
More...