DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTPAST
Uniprot ID:
O14497
Source protein:
AT-rich interactive domain-containing protein 1A
Source gene:
ARID1A
Class:
DEG_SCF_FBW7_1
Location:
1162:1168
E3 ligase:
FBXW7
DEGRON score:
0.9973
ASA_SCORE:
83.0857
COIL:
0.9677
CONS_SCORE:
0.5028
DSS_SCORE:
0.8536
HELIX:
0.0131
FCONS_SCORE:
1.1618
RIG_SCORE:
0.5394
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1165Q
TCGA-D3-A3C6
SKCM
TCGA
PPTPAST
DEG_SCF_FBW7_1
0.7035
p.P1165Q
DO37507
SKCM
ICGC
PPTPAST
DEG_SCF_FBW7_1
0.7035
p.M1154T
TCGA-EY-A1GF
UCEC
TCGA
PPTPAST
DEG_SCF_FBW7_1
0.1111
p.M1154T
DO41704
UCEC
ICGC
PPTPAST
DEG_SCF_FBW7_1
0.1111
p.M1154I
DO227987
COCA
ICGC
PPTPAST
DEG_SCF_FBW7_1
0.1111
p.E1156G
DO23490
LINC
ICGC
PPTPAST
DEG_SCF_FBW7_1
0.1667
p.I1173N
SIDM02059
Colorectal Carcinoma
GDSC
PPTPAST
DEG_SCF_FBW7_1
0.1944
p.G1178A
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
PPTPAST
DEG_SCF_FBW7_1
0.0556
p.G1178A
ACH-000929
Lung Cancer
CCLE
PPTPAST
DEG_SCF_FBW7_1
0.0556
p.G1178A
NCI-H2110
lung
COSMIC
PPTPAST
DEG_SCF_FBW7_1
0.0556
Drug responses associated with ARID1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTPAST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14497
AT-rich interactive domain-containing protein 1A
DEG_SCF_FBW7_1
1162:1168
PPTPAST
FBXW7
0.9973
More...
Q8NFD5
AT-rich interactive domain-containing protein 1B
DEG_SCF_FBW7_1
1199:1205
PPTPAST
FBXW7
0.9967
More...