DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTPTTS
Uniprot ID:
O15054
Source protein:
Lysine-specific demethylase 6B
Source gene:
KDM6B
Class:
DEG_SCF_FBW7_1
Location:
546:552
E3 ligase:
FBXW7
DEGRON score:
0.9817
ASA_SCORE:
101.1143
COIL:
0.9744
CONS_SCORE:
0.414
DSS_SCORE:
0.8239
HELIX:
0.0123
FCONS_SCORE:
1.1085
RIG_SCORE:
0.5248
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S562I
TCGA-A5-A0G2
UCEC
TCGA
PPTPTTS
DEG_SCF_FBW7_1
0.0556
p.S562I
DO41235
UCEC
ICGC
PPTPTTS
DEG_SCF_FBW7_1
0.0556
p.S552N
TCGA-DU-6392
LGG
TCGA
PPTPTTS
DEG_SCF_FBW7_1
0.7069
p.S552N
DO22237
LGG
ICGC
PPTPTTS
DEG_SCF_FBW7_1
0.7069
p.D539N
TCGA-EO-A22U
UCEC
TCGA
PPTPTTS
DEG_SCF_FBW7_1
0.1389
p.D539N
DO43755
UCEC
ICGC
PPTPTTS
DEG_SCF_FBW7_1
0.1389
p.T551P
DO229050
LICA
ICGC
PPTPTTS
DEG_SCF_FBW7_1
0.5919
p.G559A
SIDM00602
Gastric Carcinoma
GDSC
PPTPTTS
DEG_SCF_FBW7_1
0.1389
p.G559A
SIDM00082
Melanoma
GDSC
PPTPTTS
DEG_SCF_FBW7_1
0.1389
p.G559A
SIDM01078
Small Cell Lung Carcinoma
GDSC
PPTPTTS
DEG_SCF_FBW7_1
0.1389
p.G559A
SIDM00758
Non-Small Cell Lung Carcinoma
GDSC
PPTPTTS
DEG_SCF_FBW7_1
0.1389
p.G559A
SIDM00665
Gastric Carcinoma
GDSC
PPTPTTS
DEG_SCF_FBW7_1
0.1389
p.P549S
SIDM00333
Endometrial Carcinoma
GDSC
PPTPTTS
DEG_SCF_FBW7_1
0.6752
p.P549S
ACH-000988
Endometrial/Uterine Cancer
CCLE
PPTPTTS
DEG_SCF_FBW7_1
0.6752
p.N555H
ACH-001544
Esophageal Cancer
CCLE
PPTPTTS
DEG_SCF_FBW7_1
0.25
Drug responses associated with KDM6B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTPTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15054
Lysine-specific demethylase 6B
DEG_SCF_FBW7_1
546:552
PPTPTTS
FBXW7
0.9817
More...
O43155
Leucine-rich repeat transmembrane protein FLRT2
DEG_SCF_FBW7_1
397:403
PPTPTTS
FBXW7
0.9719
More...