DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTTPCST
Uniprot ID:
O75581
Source protein:
Low-density lipoprotein receptor-related protein 6
Source gene:
LRP6
Class:
DEG_SCF_FBW7_1
Location:
1527:1534
E3 ligase:
FBXW7
DEGRON score:
0.998
ASA_SCORE:
69.5625
COIL:
0.9105
CONS_SCORE:
0.5182
DSS_SCORE:
0.3048
HELIX:
0.0348
FCONS_SCORE:
1.2699
RIG_SCORE:
0.6964
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1523W
TCGA-02-0047
GBM
TCGA
PPTTPCST
DEG_SCF_FBW7_1
0.2222
p.Y1541S
TCGA-55-8614
LUAD
TCGA
PPTTPCST
DEG_SCF_FBW7_1
0.5833
p.P1519S
TCGA-FI-A2D0
UCEC
TCGA
PPTTPCST
DEG_SCF_FBW7_1
0.1111
p.H1524Q
TCGA-GL-A59R
KIRP
TCGA
PPTTPCST
DEG_SCF_FBW7_1
0.25
p.H1524Y
TCGA-IB-7651
PAAD
TCGA
PPTTPCST
DEG_SCF_FBW7_1
0.25
p.Q1531K
DO229019
LICA
ICGC
PPTTPCST
DEG_SCF_FBW7_1
0.6944
p.P1525H
DO229015
LICA
ICGC
PPTTPCST
DEG_SCF_FBW7_1
0.2778
p.T1527K
DO229041
LICA
ICGC
PPTTPCST
DEG_SCF_FBW7_1
0.7306
p.S1534P
DO26260
LUAD
ICGC
PPTTPCST
DEG_SCF_FBW7_1
0.6752
p.R1529Q
DO41758
UCEC
ICGC
PPTTPCST
DEG_SCF_FBW7_1
0.7329
p.Y1520H
SIDM02041
Colorectal Carcinoma
GDSC
PPTTPCST
DEG_SCF_FBW7_1
0.5833
p.R1523Q
SIDM01033
Bladder Carcinoma
GDSC
PPTTPCST
DEG_SCF_FBW7_1
0.2222
p.R1523Q
SIDM01612
Endometrial Carcinoma
GDSC
PPTTPCST
DEG_SCF_FBW7_1
0.2222
p.R1523Q
KU-19-19
urinary_tract
COSMIC
PPTTPCST
DEG_SCF_FBW7_1
0.2222
p.V1536I
SIDM01619
Endometrial Carcinoma
GDSC
PPTTPCST
DEG_SCF_FBW7_1
0.2778
Drug responses associated with LRP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTTPCST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75197
Low-density lipoprotein receptor-related protein 5
DEG_SCF_FBW7_1
1538:1545
PPTTPCST
FBXW7
0.9143
More...
O75581
Low-density lipoprotein receptor-related protein 6
DEG_SCF_FBW7_1
1527:1534
PPTTPCST
FBXW7
0.998
More...